RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 LARP4Q71RC2 724 aaKnown RBP eCLIP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CUZD1Q86UP6 607 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TRPV3Q8NET8 790 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PPHLN1Q8NEY8 458 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 GRIN3AQ8TCU5 1115 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 OSCP1Q8WVF1 389 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC39A13Q96H72 371 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 MARK4Q96L34 752 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 FCRL2Q96LA5 508 aaPredicted RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 CEP41Q9BYV8 373 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 PAIP1Q9H074 479 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 WDCPQ9H6R7 721 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TMEM45AQ9NWC5 275 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 AGO1Q9UL18 857 aaKnown RBP11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
TSPAN1-201ENST00000372003 TYW5A2RUC4 315 aaKnown RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 FUOMA2VDF0 154 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ZNF839A8K0R7 811 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 SUPT3HO75486 399 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ANXA9O76027 345 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ATE1O95260 518 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 MATN4O95460 622 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 F9P00740 461 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 CCR1P32246 355 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 GLRBP48167 497 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ARCN1P48444 511 aaKnown RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 BCAP31P51572 246 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC7A2P52569 658 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 SLC12A2P55011 1212 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 CDH15P55291 814 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 GRIK2Q13002 908 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 EIF4EBP2Q13542 120 aaPredicted RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 RAB39AQ14964 217 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ACAP2Q15057 778 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ARL13BQ3SXY8 428 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 CCNYL2Q5T2Q4 361 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 KIAA0930Q6ICG6 404 aaPredicted RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 TPGS1Q6ZTW0 290 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 USP51Q70EK9 711 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 FKBP9P1Q75LS8 142 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ADGRG2Q8IZP9 1017 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 CBR4Q8N4T8 237 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 DHRSXQ8N5I4 330 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 MINDY2Q8NBR6 621 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 L3HYPDHQ96EM0 354 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 NRBF2Q96F24 287 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 MAGED4Q96JG8 741 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 FCRL5Q96RD9 977 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 OLFM1Q99784 485 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 FAM83CQ9BQN1 747 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 OSBPL2Q9H1P3 480 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 GPN2Q9H9Y4 310 aaPredicted RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 IGSF5Q9NSI5 407 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 INTS10Q9NVR2 710 aaKnown RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 CCDC167Q9P0B6 97 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 FADS3Q9Y5Q0 445 aa11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 ZNF638Q14966 1978 aaKnown RBP11.34□□□□□ -0.59
TSPAN1-201ENST00000372003 DENND4AQ7Z401 1863 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 MYO16Q9Y6X6 1858 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC9A3R1O14745 358 aaPredicted RBP11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CLOCKO15516 846 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TSPAN3O60637 253 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 DNAJB5O75953 348 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 IGLV3-27P01718 113 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 FGF4P08620 206 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 LTA4HP09960 611 aaKnown RBP11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC2A3P11169 496 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 IMPDH1P20839 514 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 ATP6V1B2P21281 511 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 GPX3P22352 226 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 GRIA3P42263 894 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 ABCG1P45844 678 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC11A2P49281 568 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CXCR3P49682 368 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CLCN5P51795 746 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 PRAMEP78395 509 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 NFKB2Q00653 900 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CTBSQ01459 385 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 GSTM4Q03013 218 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 RING1Q06587 406 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 RALGDSQ12967 914 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 EML3Q32P44 896 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 AASDHQ4L235 1098 aaPredicted RBP11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 ANKRD26P1Q6NSI1 321 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CYP2R1Q6VVX0 501 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 Q6ZNB5 142 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 FRA10AC1Q70Z53 315 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 PTRH1Q86Y79 214 aaKnown RBP11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 EPHX4Q8IUS5 362 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CEP97Q8IW35 865 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TBC1D21Q8IYX1 336 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 ATP6V0D2Q8N8Y2 350 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CSGALNACT1Q8TDX6 532 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 HEXDCQ8WVB3 486 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 IRF7Q92985 503 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms