RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ERVK-6Q9BXR3 956 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 MAN2B1O00754 1011 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 INPP4BO15327 924 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 DCTN3O75935 186 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 KIAA0754O94854 1291 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 COL9A1P20849 921 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 CCR7P32248 378 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 PFKFB4Q16877 469 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 TTC31Q49AM3 519 aaPredicted RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 FBXO39Q8N4B4 442 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 PTGR2Q8N8N7 351 aaPredicted RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 TRMOQ9BU70 441 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 CD248Q9HCU0 757 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 CNOT6Q9ULM6 557 aaKnown RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 IGLON5A6NGN9 336 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 HK2P52789 917 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 AQP5P55064 265 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 SFSWAPQ12872 951 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 AGERQ15109 404 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 ZNF678Q5SXM1 525 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 CCDC121Q6ZUS5 278 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 RPLP0P6Q8NHW5 317 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 EPHX3Q9H6B9 360 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 EML4Q9HC35 981 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 PNPOQ9NVS9 261 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 HAO1Q9UJM8 370 aa25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 ATXN2Q99700 1313 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-202ENST00000371937 CHRNGP07510 517 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 C7P10643 843 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 GALNT1Q10472 559 aaPredicted RBP25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 SETDB1Q15047 1291 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 PLEKHS1Q5SXH7 462 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 DEFB123Q8N688 67 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 ZNF781Q8N8C0 355 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 MOCOSQ96EN8 888 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 SIPA1Q96FS4 1042 aa25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 FAM126AQ9BYI3 521 aaPredicted RBP25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 MBD1Q9UIS9 605 aaPredicted RBP25.89■■□□□ 1.74
ATPAF1-202ENST00000371937 SHISA7A6NL88 538 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 K7ESM1 405 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 SGTAO43765 313 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 KLK8O60259 260 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 RPL14P50914 215 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 NAA20P61599 178 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 FRMD7Q6ZUT3 714 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 FRA10AC1Q70Z53 315 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 LSMEM2Q8N112 164 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 PELI3Q8N2H9 469 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 RASGEF1AQ8N9B8 481 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 CCT6BQ92526 530 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 WWP1Q9H0M0 922 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 STN1Q9H668 368 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 ACSS2Q9NR19 701 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 OR2AG2A6NM03 316 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 LOC730098B7Z3J9 87 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 STX16-NPEPL1H3BU86 382 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 STX16O14662 325 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 PLRG1O43660 514 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 SNX2O60749 519 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 ATG13O75143 517 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 SUPT7LO94864 414 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 RPS21P63220 83 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 ZNF648Q5T619 568 aaPredicted RBP25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 KBTBD6Q86V97 674 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 GBP7Q8N8V2 638 aaPredicted RBP25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 ASZ1Q8WWH4 475 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 LRRC37BQ96QE4 947 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 KDM4CQ9H3R0 1056 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 NUDT4Q9NZJ9 180 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 FZD4Q9ULV1 537 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 MMP17Q9ULZ9 603 aa25.88■■□□□ 1.73
ATPAF1-202ENST00000371937 SLCO1B7G3V0H7 640 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 ALOX15P16050 662 aaPredicted RBP25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 PRLHRP49683 370 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 ALDH18A1P54886 795 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 HSPA14Q0VDF9 509 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 GBX1Q14549 363 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 TGFBIQ15582 683 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 KIAA1161Q6NSJ0 714 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 SBSNQ6UWP8 590 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 ADAMTSL4Q6UY14 1074 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 CYHR1Q6ZMK1 362 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 USP30Q70CQ3 517 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 KIRREL3Q8IZU9 778 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 OR14C36Q8NHC7 312 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 ELMO1Q92556 727 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 ASB2Q96Q27 587 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 TRIM39Q9HCM9 518 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 ABCF3Q9NUQ8 709 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 CD274Q9NZQ7 290 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 NCKAP1Q9Y2A7 1128 aa25.87■■□□□ 1.73
ATPAF1-202ENST00000371937 CDK14O94921 469 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 MLF2Q15773 248 aaPredicted RBP25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 PNCKQ6P2M8 343 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 ZNF852Q6ZMS4 543 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 HIC2Q96JB3 615 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 ZNF514Q96K75 400 aaPredicted RBP25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 SLC6A17Q9H1V8 727 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 GSTO2Q9H4Y5 243 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms