RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 AGAP2Q99490 1192 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 ZSCAN5AQ9BUG6 496 aa14.57□□□□□ -0.08
NDC1-201ENST00000371429 B4DGG1 531 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 RGS20O76081 388 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 TOP3BO95985 862 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 CYBAP13498 195 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 BNC1Q01954 994 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 LRRC74BQ6ZQY2 392 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 LYSMD3Q7Z3D4 306 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 C8orf59Q8N0T1 100 aaPredicted RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 CPSF7Q8N684 471 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 TERB1Q8NA31 727 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 MOSPD2Q8NHP6 518 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 SLC22A18Q96BI1 424 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 SERHL2Q9H4I8 314 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 NEK6Q9HC98 313 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 SERHLQ9NQF3 203 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 EIF2B4Q9UI10 523 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 C3orf18Q9UK00 162 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 TTC24A2A3L6 582 aaPredicted RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 RB1P06400 928 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 SLC1A2P43004 574 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 PDE12Q6L8Q7 609 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 C12orf76Q8N812 135 aaPredicted RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 POP5Q969H6 163 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 HBEGFQ99075 208 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 ZDHHC3Q9NYG2 299 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 SEC14L3Q9UDX4 400 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 TRPS1Q9UHF7 1281 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 ADAMTSL3P82987 1691 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 NEMP2A6NFY4 417 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 TGDSO95455 350 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 CST1P01037 141 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 NDUFS1P28331 727 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 PLA2G16P53816 162 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 TAS2R41P59536 307 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 NEDD8Q15843 81 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 MS4A13Q5J8X5 152 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 CLEC6AQ6EIG7 209 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 OTUB2Q96DC9 234 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 CNPPD1Q9BV87 410 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 EGFL7Q9UHF1 273 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 UPK3BL1B0FP48 263 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 UPK3BL2E5RIL1 263 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 STX11O75558 287 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 OR4F21O95013 312 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 UROSP10746 265 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 AQP1P29972 269 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 ULK2Q8IYT8 1036 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 IQCKQ8N0W5 287 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 DCAF4L2Q8NA75 395 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 PLEKHO2Q8TD55 490 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 DNASE1L2Q92874 299 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 ESAMQ96AP7 390 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 C5orf34Q96MH7 638 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 MRPS30Q9NP92 439 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 PAPOLBQ9NRJ5 636 aaKnown RBP14.56□□□□□ -0.08
NDC1-201ENST00000371429 MTRRQ9UBK8 725 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 MYRFQ9Y2G1 1151 aa14.56□□□□□ -0.08
NDC1-201ENST00000371429 MTX2O75431 263 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 CAPN1P07384 714 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 NR1D2Q14995 579 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 SLC30A9Q6PML9 568 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 CPNE8Q86YQ8 564 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 PNPT1Q8TCS8 783 aaKnown RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 PPM1MQ96MI6 270 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 GAL3ST4Q96RP7 486 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 ZNF142P52746 1687 aaPredicted RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 SPEF2Q9C093 1822 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 BBIP1A8MTZ0 92 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 LAMP2P13473 410 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 VIPR1P32241 457 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 ZNF460Q14592 562 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 HEPACAMQ14CZ8 416 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 TMEM164Q5U3C3 297 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 C22orf39Q6P5X5 142 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 POMZP3Q6PJE2 187 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 FAM220AQ7Z4H9 259 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 MCEMP1Q8IX19 187 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 OVCA2Q8WZ82 227 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 CDKN2AIPNLQ96HQ2 116 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 COQ6Q9Y2Z9 468 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 OR51F1A6NGY5 319 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 PSMG1O95456 288 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 AVPR1BP47901 424 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 POLR2JP52435 117 aaKnown RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 C1QTNF8P60827 252 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 MFSD5Q6N075 450 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 BEND5Q7L4P6 421 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 LRRTM4Q86VH4 590 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 TEFMQ96QE5 360 aaKnown RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 MIPEPQ99797 713 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 KXD1Q9BQD3 176 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 ADAMTS10Q9H324 1103 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 SFXN1Q9H9B4 322 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 GMPPBQ9Y5P6 360 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 MMP20O60882 483 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 TNFP01375 233 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 HNRNPA1P09651 372 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms