RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 FBXW11Q9UKB1 542 aa16.96■□□□□ 0.3
PTP4A1-201ENST00000370651 GLYATL1P3A0A0U1RQE8 302 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 H0Y858 1186 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 PGRP06401 933 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 AKR1D1P51857 326 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 RFTN2Q52LD8 501 aaPredicted RBP16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 FNDC3BQ53EP0 1204 aaKnown RBP16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 RAET1GQ6H3X3 334 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 ESAMQ96AP7 390 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 LRRC58Q96CX6 371 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 MIOSQ9NXC5 875 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 GULP1Q9UBP9 304 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 GSAPA4D1B5 854 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 UGT2B4P06133 528 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 TM4SF1P30408 202 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 TGFBR2P37173 567 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 PBX3P40426 434 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 BCAP31P51572 246 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 DAOAP59103 153 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 GMFBP60983 142 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 USP43Q70EL4 1123 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 OR8H1Q8NGG4 311 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 AKAP7Q9P0M2 348 aaPredicted RBP16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 TESMINQ9Y4I5 508 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 IRAK3Q9Y616 596 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 FAM92AA1XBS5 289 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 J3QRK9 145 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 BCAS2O75934 225 aaPredicted RBP16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 SNX4O95219 450 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 CDH12P55289 794 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 ERVK-8P63133 956 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 MXD1Q05195 221 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 TUSC3Q13454 348 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 MADCAM1Q13477 382 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 MOGSQ13724 837 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 BTG3Q14201 252 aaPredicted RBP16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 FBXL8Q96CD0 374 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 FBXL18Q96ME1 805 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 SMIM35A0A1B0GVV1 85 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 CHST10O43529 356 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 SEMA3DO95025 777 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 CD36P16671 472 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 HERVK_113P63132 956 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 SLC10A6Q3KNW5 377 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 AKIRIN2Q53H80 203 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 C9orf131Q5VYM1 1079 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 LAPTM4BQ86VI4 370 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 CACUL1Q86Y37 369 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 CPNE9Q8IYJ1 553 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 SMG8Q8ND04 991 aaKnown RBP16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 SLC39A3Q9BRY0 314 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 ERVK-6Q9BXR3 956 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 MED28Q9H204 178 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 ZDHHC2Q9UIJ5 367 aa16.95■□□□□ 0.3
PTP4A1-201ENST00000370651 ECDO95905 644 aaPredicted RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 OGNP20774 298 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 PRKCHP24723 683 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 CD52P31358 61 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 RPIAP49247 311 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 HLA-DQA1Q5Y7H0 255 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 MBLAC2Q68D91 279 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 CLEC4CQ8WTT0 213 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 LIN28AQ9H9Z2 209 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 MTRRQ9UBK8 725 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 PTBP2Q9UKA9 531 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 PCSK2P16519 638 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 TAF10Q12962 218 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 CAPN13Q6MZZ7 669 aaPredicted RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 SCAIQ8N9R8 606 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 IPCEF1Q8WWN9 437 aaPredicted RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 C12orf43Q96C57 262 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 KCNS3Q9BQ31 491 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 MRPL17Q9NRX2 175 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 SEMA3GQ9NS98 782 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 EXD2Q9NVH0 621 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 KNDC1Q76NI1 1749 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 FGBP02675 491 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 C8BP07358 591 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 ANXA4P09525 319 aaPredicted RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 OMPP47874 163 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 OGDHQ02218 1023 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 ZNHIT3Q15649 155 aaPredicted RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 HID1Q8IV36 788 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 GPC2Q8N158 579 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 DMRTB1Q96MA1 342 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 CNPPD1Q9BV87 410 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 DLX3O60479 287 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 FMO3P31513 532 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 HOXD13P35453 343 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 SLC25A11Q02978 314 aaKnown RBP16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 SLC35G1Q2M3R5 365 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 NEK5Q6P3R8 708 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 TREML1Q86YW5 311 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 RACGAP1Q9H0H5 632 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 AKTIPQ9H8T0 292 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 C1orf109Q9NX04 203 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 N6AMT1Q9Y5N5 214 aa16.94■□□□□ 0.3
PTP4A1-201ENST00000370651 OAS3Q9Y6K5 1087 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms