RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 GP1BAP07359 652 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 GIMD1P0DJR0 217 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 F3P13726 295 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 ACP1P24666 158 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
SSR4-202ENST00000370085 CTSCP53634 463 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 E2F1Q01094 437 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 DMPKQ09013 629 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
SSR4-202ENST00000370085 KIR2DS5Q14953 304 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 C14orf28Q4W4Y0 310 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 PTRHD1Q6GMV3 140 aaKnown RBP13.54□□□□□ -0.24
SSR4-202ENST00000370085 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 KCNMB4Q86W47 210 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 ZNF547Q8IVP9 402 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 PALM2Q8IXS6 379 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 SLC35F3Q8IY50 421 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 NOA1Q8NC60 698 aaKnown RBP13.54□□□□□ -0.24
SSR4-202ENST00000370085 GPR156Q8NFN8 814 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 OR2L2Q8NH16 312 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 MAPK15Q8TD08 544 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 SEC14L1Q92503 715 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 PANX3Q96QZ0 392 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 CCM2Q9BSQ5 444 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 CCDC68Q9H2F9 335 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 L2HGDHQ9H9P8 463 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
SSR4-202ENST00000370085 INTS10Q9NVR2 710 aaKnown RBP13.54□□□□□ -0.24
SSR4-202ENST00000370085 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 PCDHB1Q9Y5F3 818 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 TEX264Q9Y6I9 313 aa13.54□□□□□ -0.24
SSR4-202ENST00000370085 ZCWPW2A0A1B0GU75 182 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 SPAARA0A1B0GVQ0 90 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 CPED1A4D0V7 1026 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
SSR4-202ENST00000370085 RHPN2P1A8MT19 583 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 E7ESA3 106 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 KPNA5O15131 536 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 NUDT21O43809 227 aaKnown RBP13.53□□□□□ -0.24
SSR4-202ENST00000370085 SLC35G4P0C7Q5 338 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 PRSS56P0CW18 603 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 GLB1P16278 677 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 ARCN1P48444 511 aaKnown RBP13.53□□□□□ -0.24
SSR4-202ENST00000370085 B4GALNT1Q00973 533 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 CBLBQ13191 982 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 CUL1Q13616 776 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 TYSND1Q2T9J0 566 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 SYTL3Q4VX76 610 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 AGAP9Q5VTM2 703 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 ZNF470Q6ECI4 717 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 WASH2PQ6VEQ5 465 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 C11orf96Q7Z7L8 435 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 CCDC25Q86WR0 208 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 TRIM48Q8IWZ4 208 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 IFT20Q8IY31 132 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 KYQ8NBH2 561 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 WDR48Q8TAF3 677 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 GSDMBQ8TAX9 411 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 FBXO25Q8TCJ0 367 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
SSR4-202ENST00000370085 ABCG4Q9H172 646 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 SAYSD1Q9NPB0 183 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 WASH6PQ9NQA3 447 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 PLEKHM1Q9Y4G2 1056 aa13.53□□□□□ -0.24
SSR4-202ENST00000370085 GOLGA8KD6RF30 607 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 GOLGA8TH3BQL2 631 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 IFRD1O00458 451 aaPredicted RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 GIPC1O14908 333 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 LIN7AO14910 233 aaPredicted RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 BANF1O75531 89 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 ESR1P03372 595 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 GSTA2P09210 222 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 FTH1P19P0C7X4 201 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 PNLIPP16233 465 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■■■■ 35
SSR4-202ENST00000370085 ARNTP27540 789 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 CA5AP35218 305 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 ACADVLP49748 655 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 ADARP55265 1226 aaKnown RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 ILF2Q12905 390 aaKnown RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 RPA4Q13156 261 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 DNAJC3Q13217 504 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 FRG1Q14331 258 aaKnown RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 TMED2Q15363 201 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 HP1BP3Q5SSJ5 553 aaPredicted RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 METRNLQ641Q3 311 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 UNC5AQ6ZN44 842 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 KIAA0408Q6ZU52 694 aa13.52□□□□□ -0.25
SSR4-202ENST00000370085 EFL1Q7Z2Z2 1120 aaKnown RBP13.52□□□□□ -0.25
SSR4-202ENST00000370085 ANKMY2Q8IV38 441 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms