RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 P3H2Q8IVL5 708 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ADHFE1Q8IWW8 467 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF786Q8N393 782 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CHCHD4Q8N4Q1 142 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TTC9BQ8N6N2 239 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 KLHL23Q8NBE8 558 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ING5Q8WYH8 240 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 NELL1Q92832 810 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 MTFMTQ96DP5 389 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 LRIG1Q96JA1 1093 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZFRQ96KR1 1074 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 MGME1Q9BQP7 344 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TMEM79Q9BSE2 394 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TTLL2Q9BWV7 592 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC2A11Q9BYW1 496 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 GRIP2Q9C0E4 1043 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CEP44Q9C0F1 390 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ATXN10Q9UBB4 475 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNHIT2Q9UHR6 403 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ENOPH1Q9UHY7 261 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 EIF2B4Q9UI10 523 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 RPS6KA6Q9UK32 745 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ASF1AQ9Y294 204 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TIMM22Q9Y584 194 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 KCTD3Q9Y597 815 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 MCM3APO60318 1980 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 DHRS12A0PJE2 317 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 K7EPI3 171 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 OR4F21O95013 312 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 S1PR4O95977 384 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 GSRP00390 522 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 DNTTP04053 509 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CAPN1P07384 714 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ANXA6P08133 673 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ADH5P11766 374 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF37AP17032 561 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 HTR1BP28222 390 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 HOXC13P31276 330 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 VIPR1P32241 457 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 MAGEA3P43357 314 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 THOP1P52888 689 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ADARP55265 1226 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ACTR3P61158 418 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ERVK-8P63133 956 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 UBE3AQ05086 875 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TRAF2Q12933 501 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PLCL1Q15111 1095 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CCDC92Q53HC0 331 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 UBAP2Q5T6F2 1119 aaKnown RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 KDELC1Q6UW63 502 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 FRMD7Q6ZUT3 714 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 MTSS1LQ765P7 747 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 LPCAT2Q7L5N7 544 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 DHRSXQ8N5I4 330 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 DNAJB8Q8NHS0 232 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 POF1BQ8WVV4 589 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 OR52E6Q96RD3 313 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZIC5Q96T25 663 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PIF1Q9H611 641 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 GALNT8Q9NY28 637 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TMCC3Q9ULS5 477 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PADI4Q9UM07 663 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 POLR3HQ9Y535 204 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 A0A088AWK7 358 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 SMIM31A0A1B0GVY4 71 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 C2orf78A6NCI8 922 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CACNB4O00305 520 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TNFRSF10BO14763 440 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 WNT9AO14904 365 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 SNNO75324 88 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TBX10O75333 385 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 EPHX1P07099 455 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ENO2P09104 434 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ALPIP09923 528 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TYRP14679 529 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF10P21506 573 aaPredicted RBP5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 RRM2P31350 389 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ARL4DP49703 201 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CHN2P52757 468 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 LAPTM5Q13571 262 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PDK3Q15120 406 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 PDGFRLQ15198 375 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 CHRNA6Q15825 494 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TECRLQ5HYJ1 363 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 REP15Q6BDI9 236 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 B3GNT6Q6ZMB0 384 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF276Q8N554 614 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TERB1Q8NA31 727 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 IRF7Q92985 503 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 TOP1MTQ969P6 601 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 RIPOR3Q96MK2 946 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 RTP3Q9BQQ7 232 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ACSS2Q9NR19 701 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 IL36AQ9UHA7 158 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 ZDHHC2Q9UIJ5 367 aa5.25□□□□□ -1.57
SMNDC1-202ENST00000369603 UPK3BL1B0FP48 263 aa5.24□□□□□ -1.57
SMNDC1-202ENST00000369603 UPK3BL2E5RIL1 263 aa5.24□□□□□ -1.57
SMNDC1-202ENST00000369603 CLOCKO15516 846 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms