RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ARL10Q8N8L6 244 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 MFSD14AQ96MC6 490 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 KREMEN1Q96MU8 473 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 AGAP2Q99490 1192 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 PNPLA3Q9NST1 481 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 TSPAN9O75954 239 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 RPIAP49247 311 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 SWI5Q1ZZU3 235 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 CYB5D2Q8WUJ1 264 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 CLDN9O95484 217 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 RGS8P57771 180 aaPredicted RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 ENPEPQ07075 957 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 OR10H4Q8NGA5 316 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 TEFMQ96QE5 360 aaKnown RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 GTF2IRD1Q9UHL9 959 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 MRPS33Q9Y291 106 aaKnown RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 ASGR1P07306 291 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 ARCN1P48444 511 aaKnown RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 GRM3Q14832 879 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 LARS2Q15031 903 aaKnown RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 SLC5A9Q2M3M2 681 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 GALNT7Q86SF2 657 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 LCN9Q8WX39 176 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 LRTOMTQ8WZ04 291 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 CAPN8A6NHC0 703 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 ATP6V0D1P61421 351 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 ARSHQ5FYA8 562 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 LRRC55Q6ZSA7 311 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 AADATQ8N5Z0 425 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 TOP1MTQ969P6 601 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 DNAJA3Q96EY1 480 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 BTN2A3PQ96KV6 586 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 POLR3BQ9NW08 1133 aaPredicted RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 ZNF510Q9Y2H8 683 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 HBS1LQ9Y450 684 aaKnown RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 E7ENX8 843 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 PER2O15055 1255 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 METTL18O95568 372 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 IDSP22304 550 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 LMO2P25791 158 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 RHBDL3P58872 404 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 ANKRD22Q5VYY1 191 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 OLFML1Q6UWY5 402 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 SLC22A15Q8IZD6 547 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 ZNF135P52742 658 aaPredicted RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 CACNG1Q06432 222 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 CPSF7Q8N684 471 aaKnown RBP17.98■□□□□ 0.47
SNX27-202ENST00000368841 GPR20Q99678 358 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 CHCHD6Q9BRQ6 235 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 ABCB8Q9NUT2 735 aa17.98■□□□□ 0.47
SNX27-202ENST00000368841 OR4F21O95013 312 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 CFIP05156 583 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 TRAP1Q12931 704 aaKnown RBP17.97■□□□□ 0.47
SNX27-202ENST00000368841 DLK2Q6UY11 383 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 AKAP14Q86UN6 197 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 PRMT3O60678 531 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 DGKEP52429 567 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 RAB25P57735 213 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 ALG1LQ6GMV1 187 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 MCFD2Q8NI22 146 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 MCCC2Q9HCC0 563 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 DISP2A7MBM2 1401 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 A0A0X1KG70 313 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 BPGMP07738 259 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 LAMP2P13473 410 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 IRF9Q00978 393 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 LIPEQ05469 1076 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 UNC5BQ8IZJ1 945 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 RDH11Q8TC12 318 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 COQ8BQ96D53 544 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 OSBPL11Q9BXB4 747 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 CD247P20963 164 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNX27-202ENST00000368841 SCLYQ96I15 445 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 RTKNQ9BST9 563 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 SAMD4AQ9UPU9 718 aaKnown RBP17.97■□□□□ 0.47
SNX27-202ENST00000368841 MAPRE3Q9UPY8 281 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 NR2F6P10588 404 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 HOXB8P17481 243 aaPredicted RBP17.97■□□□□ 0.47
SNX27-202ENST00000368841 BMP6P22004 513 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 SLC1A5Q15758 541 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 SFRP1Q8N474 314 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 PSMG2Q969U7 264 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 PCED1BQ96HM7 432 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 SRMSQ9H3Y6 488 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 BTBD19C9JJ37 291 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 WRBO00258 174 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 C2orf27AQ580R0 203 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 MED27Q6P2C8 311 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 LINGO2Q7L985 606 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 ARCQ7LC44 396 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 SPATA19Q7Z5L4 167 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 HERVK_113Q902F9 699 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 MFSD3Q96ES6 412 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 DIRAS2Q96HU8 199 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 DMRTB1Q96MA1 342 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNX27-202ENST00000368841 GBA3Q9H227 469 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 PRDM8Q9NQV8 689 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms