RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NSMCE4AQ9NXX6 385 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 NKIRAS1Q9NYS0 192 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 TXNDC16Q9P2K2 825 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 OR51B4Q9Y5P0 310 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 MUC3AQ02505 3323 aa8.74□□□□□ -1.01
TPM3-213ENST00000368545 MAP1BP46821 2468 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 MYO7AQ13402 2215 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 ZCWPW2A0A1B0GU75 182 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 LOC285095A0A1B0GVY8 99 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 TMEM120BA0PK00 339 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 HEATR9A2RTY3 570 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 H3BML4 177 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 SCDO00767 359 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 FAM155BO75949 473 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 SYPP08247 313 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 SNRPAP09012 282 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 CLEC2LP0C7M8 214 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 CHN1P15882 459 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 CA4P22748 312 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 GLDCP23378 1020 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 ADRA1DP25100 572 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 CSKP41240 450 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 SERPINH1P50454 418 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 NOVA1P51513 510 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 NSUN2Q08J23 767 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPM3-213ENST00000368545 SLC44A4Q53GD3 710 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 CT83Q5H943 113 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 FSCBQ5H9T9 825 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 PDPK2PQ6A1A2 396 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 RETSATQ6NUM9 610 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 TRMT10BQ6PF06 316 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 NLRP9Q7RTR0 991 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 MYLK4Q86YV6 388 aaPredicted RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 GABPB2Q8TAK5 448 aaPredicted RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 MZB1Q8WU39 189 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 NUDCD1Q96RS6 583 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 INTS9Q9NV88 658 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 CCL26Q9Y258 94 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 TCAF1Q9Y4C2 921 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 USP24Q9UPU5 2620 aa8.73□□□□□ -1.01
TPM3-213ENST00000368545 TPRP12270 2363 aaKnown RBP8.73□□□□□ -1.01
TPM3-213ENST00000368545 FAM47DPA6NHR8 397 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CXorf49A8MYA2 514 aaPredicted RBP8.72□□□□□ -1.01
TPM3-213ENST00000368545 MUSKO15146 869 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 INSIG1O15503 277 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 ZMPSTE24O75844 475 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 TMCC1O94876 653 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 UBXN7O94888 489 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 PRAMEF12O95522 483 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CEBPBP17676 345 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CR2P20023 1033 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CD40P25942 277 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 PLK1P53350 603 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 RPL11P62913 178 aaKnown RBP8.72□□□□□ -1.01
TPM3-213ENST00000368545 NTHL1P78549 312 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CDK18Q07002 472 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 DNAJC3Q13217 504 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 POU6F1Q14863 301 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 TPGS1Q6ZTW0 290 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 KCNMB4Q86W47 210 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 PROSER1Q86XN7 944 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 SLC41A1Q8IVJ1 513 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 WFDC5Q8TCV5 224 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 C1GALT1C1Q96EU7 318 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 ALG14Q96F25 216 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CPNE1Q99829 537 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 DUSP15Q9H1R2 295 aaPredicted RBP8.72□□□□□ -1.01
TPM3-213ENST00000368545 KCNK9Q9NPC2 374 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 TRPV5Q9NQA5 729 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CHRAC1Q9NRG0 131 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 SMYD2Q9NRG4 433 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 DKK4Q9UBT3 224 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 VPS51Q9UID3 782 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 ADAMTS20P59510 1910 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 H3BM21 787 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 NARSO43776 548 aaKnown RBP8.72□□□□□ -1.01
TPM3-213ENST00000368545 B3GALT2O43825 422 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 ZWINTO95229 277 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 PENKP01210 267 aaPredicted RBP8.72□□□□□ -1.01
TPM3-213ENST00000368545 MT-ND3P03897 115 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 LAMP2P13473 410 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 TPH1P17752 444 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 KRT4P19013 534 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 GP5P40197 560 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 UBXN2BQ14CS0 331 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CYTH1Q15438 398 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 PRR18Q8N4B5 295 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 PEX13Q92968 403 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 CCDC134Q9H6E4 229 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.72□□□□□ -1.01
TPM3-213ENST00000368545 B3GALT1Q9Y5Z6 326 aa8.72□□□□□ -1.01
TPM3-213ENST00000368545 KIF26AQ9ULI4 1882 aaPredicted RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 TM9SF1O15321 606 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 SNAP91O60641 907 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 PIAS1O75925 651 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 NDST3O95803 873 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 ATXN1LP0C7T5 689 aaKnown RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 CSE1LP55060 971 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms