RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 A0A087WZ62 844 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TCRBV7S3A2A0A539 114 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CAPN14A8MX76 684 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 KPNA7A9QM74 516 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TMEM114B3SHH9 223 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PIRO00625 290 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 FCHO1O14526 889 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 GSTA4O15217 222 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 NVLO15381 856 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PAX4O43316 350 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SUV39H1O43463 412 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 MAFKO60675 156 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 RFPL1O75677 317 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TM7SF2O76062 418 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 APBB3O95704 486 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 POLBP06746 335 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 APRTP07741 180 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 DBHP09172 617 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CD48P09326 243 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 COL6A2P12110 1019 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 KCNE1P15382 129 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ALOX15P16050 662 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ITGB6P18564 788 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 HSD3B2P26439 372 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 RBL1P28749 1068 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SPRP35270 261 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 GP5P40197 560 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 OR1G1P47890 313 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PTDSS1P48651 473 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 NPY2RP49146 381 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 GALK1P51570 392 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 DGKEP52429 567 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CSE1LP55060 971 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CDH8P55286 799 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 HDAC4P56524 1084 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 RHDQ02161 417 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 AP1B1Q10567 949 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 NFATC3Q12968 1075 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 DMC1Q14565 340 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PAFAH1B3Q15102 231 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 USP41Q3LFD5 358 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ARHGAP40Q5TG30 622 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ITPRIPL1Q6GPH6 555 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ALKAL1Q6UXT8 129 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 BEND5Q7L4P6 421 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PRUNE1Q86TP1 453 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SETD3Q86TU7 594 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ZC3H18Q86VM9 953 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 DCP2Q8IU60 420 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SCML4Q8N228 414 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 STKLD1Q8NE28 680 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ZSCAN18Q8TBC5 510 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 C18orf25Q96B23 403 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CMTM5Q96DZ9 223 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PGAP3Q96FM1 320 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 THOC1Q96FV9 657 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 MSANTD3Q96H12 275 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SERAC1Q96JX3 654 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 OLFM3Q96PB7 478 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TWNKQ96RR1 684 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 PEBP4Q96S96 227 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TMEM209Q96SK2 561 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 FDXACB1Q9BRP7 624 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 WDR83Q9BRX9 315 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CADM1Q9BY67 442 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 FAM192AQ9GZU8 254 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 DENND2DQ9H6A0 471 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ZNF552Q9H707 407 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SMYD3Q9H7B4 428 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 LRRC40Q9H9A6 602 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 IL21RQ9HBE5 538 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 DNAJC28Q9NX36 388 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TAS2R1Q9NYW7 299 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 IL1RAPL1Q9NZN1 696 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TXNDC16Q9P2K2 825 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 SLC17A7Q9P2U7 560 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ANKRD6Q9Y2G4 727 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 TRAF6Q9Y4K3 522 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 CDY1Q9Y6F8 540 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 MED13Q9UHV7 2174 aa6.48□□□□□ -1.37
ECHDC1-202ENST00000368289 ARHGEF37A1IGU5 675 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 MAGEA13PA6NCF6 341 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 PAPSS1O43252 624 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 B4GALT5O43286 388 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 TIMM44O43615 452 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 DAB1O75553 588 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 PSMG1O95456 288 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 NPTXRO95502 500 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 CBX6O95503 412 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 SERPINE1P05121 402 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 CFIP05156 583 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 SERPINF2P08697 491 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 RPSAP08865 295 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 GLI4P10075 376 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 MYL2P10916 166 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 BGNP21810 368 aa6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 WARSP23381 471 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-202ENST00000368289 EPHB2P29323 1055 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms