RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SHPRHQ149N8 1683 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ITGA1P56199 1179 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 OLIG2Q13516 323 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 GPR107Q5VW38 600 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 TRMT10BQ6PF06 316 aaKnown RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PIGKQ92643 395 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 ARMC5Q96C12 935 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PYCR2Q96C36 320 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 EXD2Q9NVH0 621 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PDP1Q9P0J1 537 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 SNPHO15079 494 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 MFN2O95140 757 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 POU2F1P14859 743 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 FSHRP23945 695 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 ALDH4A1P30038 563 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 IL10RBQ08334 325 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 GLYATQ6IB77 296 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 ZYG11AQ6WRX3 759 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 ZNF662Q6ZS27 426 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 TMEM139Q8IV31 216 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 MARCH7Q9H992 704 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 CTPS2Q9NRF8 586 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 MIOSQ9NXC5 875 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 SORCS3Q9UPU3 1222 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 WNT6Q9Y6F9 365 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PIP5K1BO14986 540 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 SNAP91O60641 907 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 KHDRBS3O75525 346 aaKnown RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 TM7SF2O76062 418 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 NRIP1P48552 1158 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 FOLH1Q04609 750 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 KLF10Q13118 480 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PCBP2Q15366 365 aaKnown RBP eCLIP12.76□□□□□ -0.378e-7■■■■■ 36.2
PTPRK-207ENST00000368226 PERM1Q5SV97 790 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 BROXQ5VW32 411 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 REP15Q6BDI9 236 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 UNC5BQ8IZJ1 945 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 MTERF1Q99551 399 aaKnown RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 TRIM8Q9BZR9 551 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 GABRQQ9UN88 632 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 FZD9O00144 591 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 GRIA1P42261 906 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 DHPSP49366 369 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 SIM2Q14190 667 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 FAM91A1Q658Y4 838 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 A8MU76 341 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 A8MUA0 341 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 HLA-DQB2P05538 268 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 DAW1Q8N136 415 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 NUS1Q96E22 293 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 TRNT1Q96Q11 434 aaKnown RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 POLMQ9NP87 494 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-207ENST00000368226 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 NUDT4Q9NZJ9 180 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 PIK3C2AO00443 1686 aa12.76□□□□□ -0.37
PTPRK-207ENST00000368226 CPED1A4D0V7 1026 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 ACVRL1P37023 503 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 EIF2B2P49770 351 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 LIMK2P53671 638 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 HYAL2Q12891 473 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 NDUFA9Q16795 377 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 JAZF1Q86VZ6 243 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SLC34A3Q8N130 599 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TCAIMQ8N3R3 496 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 MYDGFQ969H8 173 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 OXCT2Q9BYC2 517 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 MFHAS1Q9Y4C4 1052 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 RBM7Q9Y580 266 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 J3KR12 359 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 ASNA1O43681 348 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 CTSKP43235 329 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 PURAQ00577 322 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 NFATC2Q13469 925 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 KLHL24Q6TFL4 600 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 FAM156AQ8NDB6 213 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 EEF1AKMT1Q8WVE0 214 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 RNF31Q96EP0 1072 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TCF12Q99081 682 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 IKZF2Q9UKS7 526 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 LTN1O94822 1766 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 hCG_2039718K7EN88 272 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 MGRN1O60291 552 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 STX11O75558 287 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 GIMD1P0DJR0 217 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 IL1R2P27930 398 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SMIM11AP58511 58 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SUZ12Q15022 739 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TCEAL5Q5H9L2 206 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 GCNT6Q5T4J0 391 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TTC23Q5W5X9 447 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TXNRD3NBQ6F5E7 133 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms