RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 DEFA1P59665 94 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 DEFA3P59666 94 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 PRKD1Q15139 912 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 KHDC1Q4VXA5 237 aaKnown RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 MORN1Q5T089 497 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 SULT1C3Q6IMI6 304 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 TRIM40Q6P9F5 258 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 PGAM4Q8N0Y7 254 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CYP4Z2PQ8N1L4 340 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 OR4A15Q8NGL6 344 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 NDEL1Q9GZM8 345 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 S100A14Q9HCY8 104 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 C3orf18Q9UK00 162 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 KNL1Q8NG31 2342 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 COCHO43405 550 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ITGB1P05556 798 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 SLC6A2P23975 617 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 PRKCHP24723 683 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 RXRGP48443 463 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 CCNHP51946 323 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 GDPD4Q6W3E5 623 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF598Q86UK7 904 aaKnown RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 PHF10Q8WUB8 498 aaKnown RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 HERVK_113Q902F9 699 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-203ENST00000368207 SLC2A13Q96QE2 648 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 ADAM7Q9H2U9 754 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 EPS8L2Q9H6S3 715 aa12.17□□□□□ -0.46
PTPRK-203ENST00000368207 FAM149AA5PLN7 773 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 A8MT66 165 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 C2orf80Q0P641 193 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 TEAD2Q15562 447 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 RTP2Q5QGT7 225 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 CCNYL2Q5T2Q4 361 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 GALNT13Q8IUC8 556 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 MMAAQ8IVH4 418 aaKnown RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 MTERF1Q99551 399 aaKnown RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 FNIP2Q9P278 1114 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 ERVW-1Q9UQF0 538 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 BCL10O95999 233 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 FOLH1Q04609 750 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 LIPEQ05469 1076 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 RGS1Q08116 209 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 SERINC3Q13530 473 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 PAPOLBQ9NRJ5 636 aaKnown RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 GMPPBQ9Y5P6 360 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 MYH15Q9Y2K3 1946 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 PLCH1Q4KWH8 1693 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 COL18A1P39060 1754 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 NDUFB5O43674 189 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 RASGRP1O95267 797 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 PAICSP22234 425 aaKnown RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 ANXA8L1Q5VT79 327 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 REP15Q6BDI9 236 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 PLEKHM3Q6ZWE6 761 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 TMCO2Q7Z6W1 182 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-203ENST00000368207 OR52B2Q96RD2 323 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 TMLHEQ9NVH6 421 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 ENOPH1Q9UHY7 261 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 TIAM2Q8IVF5 1701 aa12.16□□□□□ -0.46
PTPRK-203ENST00000368207 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CDC7O00311 574 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 PCYT1AP49585 367 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 MRPS15P82914 257 aaKnown RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CREB5Q02930 508 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 GSTA3Q16772 222 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 TRIM16LQ309B1 348 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 UBR7Q8N806 425 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 POF1BQ8WVV4 589 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 MPP4Q96JB8 637 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 VPS35Q96QK1 796 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 GPR22Q99680 433 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 RIOK2Q9BVS4 552 aaKnown RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 TFB2MQ9H5Q4 396 aaKnown RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CCDC177Q9NQR7 707 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 GALPQ9UBC7 116 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 MAGEL2Q9UJ55 1249 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 BUD31P41223 144 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 UBXN11Q5T124 520 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SVOPQ8N4V2 548 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 TSPAN14Q8NG11 270 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SLC22A17Q8WUG5 538 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 EQTNQ9NQ60 294 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 GULP1Q9UBP9 304 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 CNOT6Q9ULM6 557 aaKnown RBP12.15□□□□□ -0.46
PTPRK-203ENST00000368207 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 LYVE1Q9Y5Y7 322 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 AKAP11Q9UKA4 1901 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 URADA6NGE7 173 aa12.15□□□□□ -0.46
PTPRK-203ENST00000368207 SUV39H1O43463 412 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms