RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 LAMB3Q13751 1172 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 C16orf72Q14CZ0 275 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 BCL7AQ4VC05 210 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 TMEM71Q6P5X7 295 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 CLEC14AQ86T13 490 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 SLC35F6Q8N357 371 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 RASGEF1CQ8N431 466 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 BEND7Q8N7W2 519 aaPredicted RBP23.49■■□□□ 1.35
PFDN2-201ENST00000368010 CXorf40BQ96DE9 158 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 UCK1Q9HA47 277 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 CASS4Q9NQ75 786 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 EIF2B3Q9NR50 452 aaKnown RBP23.49■■□□□ 1.35
PFDN2-201ENST00000368010 TRMT1Q9NXH9 659 aaKnown RBP23.49■■□□□ 1.35
PFDN2-201ENST00000368010 ZDHHC3Q9NYG2 299 aa23.49■■□□□ 1.35
PFDN2-201ENST00000368010 TRBV5-4A0A0C4DH59 114 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 CCDC78A2IDD5 438 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 MGAT4DA6NG13 374 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 OR52A4PA6NMU1 304 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 HGSO14964 777 aaPredicted RBP23.48■■□□□ 1.35
PFDN2-201ENST00000368010 THRAP10827 490 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 PSMA3P25788 255 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 BASP1P80723 227 aaKnown RBP23.48■■□□□ 1.35
PFDN2-201ENST00000368010 CFHR1Q03591 330 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 CACNG1Q06432 222 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 CCDC173Q0VFZ6 552 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 NFE2L1Q14494 772 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 COL28A1Q2UY09 1125 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 CCDC38Q502W7 563 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 FAM83HQ6ZRV2 1179 aaPredicted RBP23.48■■□□□ 1.35
PFDN2-201ENST00000368010 TMEM26Q6ZUK4 368 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 TAS2R42Q7RTR8 314 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 RCBTB1Q8NDN9 531 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 PDLIM2Q96JY6 352 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 LINC00615Q96LM1 132 aaPredicted RBP23.48■■□□□ 1.35
PFDN2-201ENST00000368010 RANBP9Q96S59 729 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 TBC1D10AQ9BXI6 508 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 WDR37Q9Y2I8 494 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 PCDHGA7Q9Y5G6 932 aa23.48■■□□□ 1.35
PFDN2-201ENST00000368010 ITIH1P19827 911 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 ADRA1DP25100 572 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 MPSTP25325 297 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 ACRV1P26436 265 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 CDKN1CP49918 316 aaPredicted RBP23.47■■□□□ 1.35
PFDN2-201ENST00000368010 WDR74Q6RFH5 385 aaPredicted RBP23.47■■□□□ 1.35
PFDN2-201ENST00000368010 SERPINA9Q86WD7 417 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 JAMLQ86YT9 394 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 RBM12BQ8IXT5 1001 aaKnown RBP23.47■■□□□ 1.35
PFDN2-201ENST00000368010 OR2L2Q8NH16 312 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 NAT14Q8WUY8 206 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 NCSTNQ92542 709 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 NAF1Q96HR8 494 aaKnown RBP23.47■■□□□ 1.35
PFDN2-201ENST00000368010 MS4A14Q96JA4 679 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 NAP1L3Q99457 506 aaPredicted RBP23.47■■□□□ 1.35
PFDN2-201ENST00000368010 TMEM9Q9P0T7 183 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 LHX6Q9UPM6 363 aa23.47■■□□□ 1.35
PFDN2-201ENST00000368010 IGLV3-16A0A075B6K0 115 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 ZZEF1O43149 2961 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 SGTAO43765 313 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 ATP1B2P14415 290 aaPredicted RBP23.46■■□□□ 1.35
PFDN2-201ENST00000368010 ITPKBP27987 946 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 PRLHRP49683 370 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 ARSDP51689 593 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 CLCA4Q14CN2 919 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 KIF26BQ2KJY2 2108 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 METRNLQ641Q3 311 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 KCNE4Q8WWG9 221 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 CCDC97Q96F63 343 aaPredicted RBP23.46■■□□□ 1.35
PFDN2-201ENST00000368010 FAM8A1Q9UBU6 413 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 TTC7AQ9ULT0 858 aaPredicted RBP23.46■■□□□ 1.35
PFDN2-201ENST00000368010 PSMD13Q9UNM6 376 aa23.46■■□□□ 1.35
PFDN2-201ENST00000368010 PRSS56P0CW18 603 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 CSTF2P33240 577 aaKnown RBP eCLIP23.45■■□□□ 1.34
PFDN2-201ENST00000368010 TSTD2Q5T7W7 516 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 MICALCLQ6ZW33 695 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 NLRP9Q7RTR0 991 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 SPACA3Q8IXA5 215 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 AGBL5Q8NDL9 886 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 PPHLN1Q8NEY8 458 aaKnown RBP23.45■■□□□ 1.34
PFDN2-201ENST00000368010 SLC40A1Q9NP59 571 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 PDP2Q9P2J9 529 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 ACSL5Q9ULC5 683 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 RIMKLBQ9ULI2 386 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 TCAF1Q9Y4C2 921 aa23.45■■□□□ 1.34
PFDN2-201ENST00000368010 CCDC162PA2VCL2 907 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 AP3B1O00203 1094 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 PGRMC1O00264 195 aaKnown RBP23.44■■□□□ 1.34
PFDN2-201ENST00000368010 ETV5P41161 510 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 MAPK10P53779 464 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 GPR18Q14330 331 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 RPE65Q16518 533 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 DBN1Q16643 649 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 PIANPQ8IYJ0 282 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 OR13J1Q8NGT2 312 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 HM13Q8TCT9 377 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 PEX13Q92968 403 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.44■■□□□ 1.34
PFDN2-201ENST00000368010 MAGOHBQ96A72 148 aaKnown RBP23.44■■□□□ 1.34
PFDN2-201ENST00000368010 OSBPL9Q96SU4 736 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 AP1M1Q9BXS5 423 aa23.44■■□□□ 1.34
PFDN2-201ENST00000368010 VPS37BQ9H9H4 285 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms