RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.58
SYNE1-204ENST00000367248 CMTR2Q8IYT2 770 aaKnown RBP11.46□□□□□ -0.58
SYNE1-204ENST00000367248 OVCA2Q8WZ82 227 aa11.46□□□□□ -0.58
SYNE1-204ENST00000367248 EXOSC8Q96B26 276 aaKnown RBP11.46□□□□□ -0.58
SYNE1-204ENST00000367248 BORCS6Q96GS4 357 aa11.46□□□□□ -0.58
SYNE1-204ENST00000367248 ITCHQ96J02 903 aa11.46□□□□□ -0.58
SYNE1-204ENST00000367248 GPR174Q9BXC1 333 aa11.46□□□□□ -0.58
SYNE1-204ENST00000367248 NOL11Q9H8H0 719 aaKnown RBP11.46□□□□□ -0.58
SYNE1-204ENST00000367248 COPG1Q9Y678 874 aaKnown RBP11.46□□□□□ -0.58
SYNE1-204ENST00000367248 CCDC162PA2VCL2 907 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 GPR32O75388 356 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CSTF2P33240 577 aaKnown RBP eCLIP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 VIPR2P41587 438 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SLC1A2P43004 574 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 KIR3DL1P43629 444 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ARL13AQ5H913 290 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 MS4A13Q5J8X5 152 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PNPT1Q8TCS8 783 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 OTUB2Q96DC9 234 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 MS4A4AQ96JQ5 239 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CCDC28BQ9BUN5 200 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 J3KR12 359 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PSMG1O95456 288 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PLA2G16P53816 162 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF155Q12901 538 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 LDLRAP1Q5SW96 308 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CCNYL2Q5T2Q4 361 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ZYG11AQ6WRX3 759 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 RMND5BQ96G75 393 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 C12orf65Q9H3J6 166 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A9O60656 530 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CNTN5O94779 1100 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A6P19224 532 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A1P22309 533 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A4P22310 534 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A3P35503 534 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A5P35504 534 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 BEND5Q7L4P6 421 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SIDT2Q8NBJ9 832 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM209Q96SK2 561 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 FIZ1Q96SL8 496 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 HBEGFQ99075 208 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 P2RY13Q9BPV8 354 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ADAM7Q9H2U9 754 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A7Q9HAW7 530 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A10Q9HAW8 530 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 UGT1A8Q9HAW9 530 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 DZANK1Q9NVP4 752 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM98Q9Y2Y6 226 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TGDSO95455 350 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TNFP01375 233 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 GKP32189 559 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CASP9P55211 416 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SLC25A11Q02978 314 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 GALNT2Q10471 571 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SLC9A4Q6AI14 798 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 YTHDF3Q7Z739 585 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 FSTL5Q8N475 847 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM40Q8WWA1 233 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SLCO2A1Q92959 643 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ABI3Q9P2A4 366 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 FAM20BO75063 409 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SERPINB7O75635 380 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 GRIA1P42261 906 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 KCNJ5P48544 419 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SLC7A2P52569 658 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 NTHL1P78549 312 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 WDR45BQ5MNZ6 344 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SAMD11Q96NU1 681 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 KCNS3Q9BQ31 491 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 RIOK2Q9BVS4 552 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 BCL2L14Q9BZR8 327 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 EPS8L2Q9H6S3 715 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 KCNK6Q9Y257 313 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PRR23D1E9PI22 279 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CAPN1P07384 714 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PRR23D2P0DMB1 279 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF132P52740 706 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 C1orf61Q13536 156 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PAFAH1B3Q15102 231 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 INO80DQ53TQ3 878 aaPredicted RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 ALYREFQ86V81 257 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SUN3Q8TAQ9 357 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 TBC1D10AQ9BXI6 508 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 PNO1Q9NRX1 252 aaKnown RBP11.45□□□□□ -0.58
SYNE1-204ENST00000367248 CNTN6Q9UQ52 1028 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 SPEF2Q9C093 1822 aa11.45□□□□□ -0.58
SYNE1-204ENST00000367248 NEMP2A6NFY4 417 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 SLC28A2O43868 658 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 GHRHRQ02643 423 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 SULT1C3Q6IMI6 304 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 CRTC1Q6UUV9 634 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 PYDC1Q8WXC3 89 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 DDX1Q92499 740 aaKnown RBP11.44□□□□□ -0.58
SYNE1-204ENST00000367248 AZIN2Q96A70 460 aa11.44□□□□□ -0.58
SYNE1-204ENST00000367248 CDKN2AIPNLQ96HQ2 116 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms