RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 A0A087WW49 117 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 KANSL1LA0AUZ9 987 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 EIF3CLB5ME19 914 aaKnown RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 EPB41L2O43491 1005 aaKnown RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 TNFSF14O43557 240 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 PI15O43692 258 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 PEX14O75381 377 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 MOCS3O95396 460 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 NGFP01138 241 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 TRIM49P0CI25 452 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 TRIM49CP0CI26 452 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 GATA2P23769 480 aaPredicted RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 MMP15P51511 669 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 CTSCP53634 463 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 EIF3BP55884 814 aaKnown RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 SNX16P57768 344 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 MAP2K1Q02750 393 aaPredicted RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 OLIG2Q13516 323 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 RAB6CQ53S08 254 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZNF805Q5CZA5 627 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 XKR6Q5GH73 641 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 NSUN5P2Q63ZY6 315 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 DOK6Q6PKX4 331 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 TSSK4Q6SA08 328 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 CLEC4GQ6UXB4 293 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 LDHAL6AQ6ZMR3 332 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 SDCCAG8Q86SQ7 713 aaPredicted RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 PTOV1Q86YD1 416 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 ANKRD18AQ8IVF6 992 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 C1orf52Q8N6N3 182 aaKnown RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 EMC1Q8N766 993 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZNF611Q8N823 705 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 OR2T12Q8NG77 320 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 HM13Q8TCT9 377 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 PSPC1Q8WXF1 523 aaKnown RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 SAAL1Q96ER3 474 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 GIMAP5Q96F15 307 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 SLC47A1Q96FL8 570 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 PKP2Q99959 881 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 RTP3Q9BQQ7 232 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 FGFBP2Q9BYJ0 223 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 RAB6CQ9H0N0 254 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 PIGMQ9H3S5 423 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 COQ3Q9NZJ6 369 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 ABI3Q9P2A4 366 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 UBA2Q9UBT2 640 aaPredicted RBP2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 ASIC3Q9UHC3 531 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 RABGAP1Q9Y3P9 1069 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 CLIC4Q9Y696 253 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 RPS6KL1Q9Y6S9 549 aa2.07□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZNF197O14709 1029 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 ATP2A1O14983 1001 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 GPR137BO60478 399 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 JRKO75564 520 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 TLX1P31314 330 aaPredicted RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 CEACAM8P31997 349 aaPredicted RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 PEX19P40855 299 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 CCR10P46092 362 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 F2RL1P55085 397 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 RHBDL3P58872 404 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 CD81P60033 236 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 VAMP2P63027 116 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 TLE2Q04725 743 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 RIGQ13278 110 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 MFAP5Q13361 173 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 TRPC3Q13507 836 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 GRAPQ13588 217 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 HNRNPDQ14103 355 aaKnown RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 RRS1Q15050 365 aaKnown RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 PRICKLE4Q2TBC4 344 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 GRAMD1BQ3KR37 738 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 FAM69AQ5T7M9 428 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 FASTKD5Q7L8L6 764 aaKnown RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 MTERF4Q7Z6M4 381 aaKnown RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 CDC20BQ86Y33 519 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 PLD3Q8IV08 490 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 LMNTD2Q8IXW0 634 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 RASGEF1CQ8N431 466 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 NGEFQ8N5V2 710 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 TMEM178AQ8NBL3 297 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 SMPDL3BQ92485 455 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 SEMA4DQ92854 862 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 FAM210AQ96ND0 272 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 SYT15Q9BQS2 421 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 MAF1Q9H063 256 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 RANBP17Q9H2T7 1088 aaKnown RBP2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 MAGIXQ9H6Y5 334 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 PNMA2Q9UL42 364 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 YIPF1Q9Y548 306 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 CSAG2Q9Y5P2 127 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 AGRNO00468 2067 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 PRAG1Q86YV5 1406 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 CCDC180Q9P1Z9 1646 aa2.06□□□□□ -2.08
RNU4-42P-201ENST00000364738 OR6C76A6NM76 312 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 PLK4O00444 970 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 WDHD1O75717 1129 aaPredicted RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 AP2A2O94973 939 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 RAF1P04049 648 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 EDN1P05305 212 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms