RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 DNASE1P24855 282 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 CCR10P46092 362 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 KCNJ4P48050 445 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 LIMK1P53667 647 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 BRWD1-AS2P59051 145 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 SNRPEP62304 92 aaKnown RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 PDE1BQ01064 536 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF273Q14593 569 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 TNIP1Q15025 636 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 VWC2Q2TAL6 325 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 SETMARQ53H47 684 aaPredicted RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 C6orf163Q5TEZ5 329 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 PLA2G4FQ68DD2 849 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 DPY19L2P1Q6NXN4 242 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 TRAT1Q6PIZ9 186 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 FIGLAQ6QHK4 219 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 SUSD1Q6UWL2 747 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 CCNI2Q6ZMN8 369 aaPredicted RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 C1QL2Q7Z5L3 287 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 CENPVQ7Z7K6 275 aaPredicted RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 METTL23Q86XA0 190 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 PGBD5Q8N414 524 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 GOT1L1Q8NHS2 421 aaPredicted RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 BBS10Q8TAM1 723 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 DEPDC1BQ8WUY9 529 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 FAM162AQ96A26 154 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 SPAG5Q96R06 1193 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 OR6C1Q96RD1 312 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 CSF3RQ99062 836 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 PCYT2Q99447 389 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 OLFM1Q99784 485 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 CNOT10Q9H9A5 744 aaKnown RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM30AQ9NV96 361 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 PRMT7Q9NVM4 692 aaPredicted RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 ARGLU1Q9NWB6 273 aaPredicted RBP3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 NME7Q9Y5B8 376 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 LIPGQ9Y5X9 500 aa3.65□□□□□ -1.83
RNU6-28P-201ENST00000362378 A0A0B4J293 547 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 FEZF1A0PJY2 475 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 LILRA5A6NI73 299 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 H0Y626 953 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 H3BNX3 289 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 PLK4O00444 970 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 DVL1O14640 695 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 MID1O15344 667 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 DIAPH2O60879 1101 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 MED24O75448 989 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 CELF2O95319 508 aaKnown RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 CLDN14O95500 239 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 MUTP22033 750 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ACHEP22303 614 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ITGB8P26012 769 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 CORO1AP31146 461 aaKnown RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 CTNNA1P35221 906 aaKnown RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 PCGF2P35227 344 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 NPY4RP50391 375 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF155Q12901 538 aaPredicted RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 PPIGQ13427 754 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 NFATC4Q14934 902 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 CCDC142Q17RM4 750 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 KLHL26Q53HC5 615 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 XKR9Q5GH70 373 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 RNASEH2BQ5TBB1 312 aaKnown RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ALS2CLQ60I27 953 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF425Q6IV72 752 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 DNAJB7Q7Z6W7 309 aaPredicted RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM173Q86WV6 379 aaPredicted RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 C1orf87Q8N0U7 546 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 TTC30BQ8N4P2 665 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF114Q8NC26 417 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 CAMKVQ8NCB2 501 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 SPATA22Q8NHS9 363 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 SLC44A1Q8WWI5 657 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ASB5Q8WWX0 329 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ATL1Q8WXF7 558 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 SECISBP2LQ93073 1101 aaKnown RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ABTB1Q969K4 478 aaPredicted RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 PIGTQ969N2 578 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 ATP6V1E2Q96A05 226 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 NXNL1Q96CM4 212 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 VMP1Q96GC9 406 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 PRMT6Q96LA8 375 aaPredicted RBP3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 GBP5Q96PP8 586 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 C16orf70Q9BSU1 422 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 FAM129AQ9BZQ8 928 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 WNT5BQ9H1J7 359 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 GRPEL1Q9HAV7 217 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 MYO6Q9UM54 1294 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 PCDHA7Q9UN72 937 aa3.64□□□□□ -1.83
RNU6-28P-201ENST00000362378 A0A087WV48 116 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 ANKUB1A6NFN9 424 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM221A6NGB7 291 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 WDR46O15213 610 aaKnown RBP3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 TSPAN1O60635 241 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 SIX3O95343 332 aaPredicted RBP3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 CRYABP02511 175 aaKnown RBP3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 GABRA5P31644 462 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 KRT2P35908 639 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 PCYT1AP49585 367 aa3.63□□□□□ -1.83
RNU6-28P-201ENST00000362378 RGS19P49795 217 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms