RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 ZNF648Q5T619 568 aaPredicted RBP17.77■□□□□ 0.43
CCDC7-203ENST00000362006 CWF19L1Q69YN2 538 aaKnown RBP17.77■□□□□ 0.43
CCDC7-203ENST00000362006 FSTL5Q8N475 847 aaPredicted RBP17.77■□□□□ 0.43
CCDC7-203ENST00000362006 GIMAP7Q8NHV1 300 aa17.77■□□□□ 0.43
CCDC7-203ENST00000362006 RHEBL1Q8TAI7 183 aa17.77■□□□□ 0.43
CCDC7-203ENST00000362006 MAGEB18Q96M61 343 aa17.77■□□□□ 0.43
CCDC7-203ENST00000362006 SLC30A3Q99726 388 aa17.77■□□□□ 0.43
CCDC7-203ENST00000362006 TPSD1Q9BZJ3 242 aa17.77■□□□□ 0.43
CCDC7-203ENST00000362006 C12orf65Q9H3J6 166 aaKnown RBP17.77■□□□□ 0.43
CCDC7-203ENST00000362006 DNMT3AQ9Y6K1 912 aaPredicted RBP17.77■□□□□ 0.43
CCDC7-203ENST00000362006 KLHL33A6NCF5 533 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 CACNB4O00305 520 aaPredicted RBP17.76■□□□□ 0.43
CCDC7-203ENST00000362006 RAD51BO15315 384 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 NDUFS2O75306 463 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 ITGB6P18564 788 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 GMPRP36959 345 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 CBX1P83916 185 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 LKAAEAR1Q8TD35 194 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 ASZ1Q8WWH4 475 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 SREK1Q8WXA9 508 aaKnown RBP17.76■□□□□ 0.43
CCDC7-203ENST00000362006 LINC00615Q96LM1 132 aaPredicted RBP17.76■□□□□ 0.43
CCDC7-203ENST00000362006 APOOQ9BUR5 198 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 GPR174Q9BXC1 333 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 C6orf106Q9H6K1 298 aaPredicted RBP17.76■□□□□ 0.43
CCDC7-203ENST00000362006 RMI1Q9H9A7 625 aa17.76■□□□□ 0.43
CCDC7-203ENST00000362006 OR2AG2A6NM03 316 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 PRAMEF26H0Y7S4 382 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CPA3P15088 417 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CCR7P32248 378 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 GNGT1P63211 74 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 TMEM31Q5JXX7 168 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 TRIM74Q86UV6 250 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CPNE9Q8IYJ1 553 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 FAM174AQ8TBP5 190 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 EEF1AKMT1Q8WVE0 214 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 KIAA1191Q96A73 305 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 FUBP1Q96AE4 644 aaKnown RBP17.75■□□□□ 0.43
CCDC7-203ENST00000362006 LINGO1Q96FE5 620 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 SPACA7Q96KW9 195 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 UHRF1Q96T88 793 aaPredicted RBP17.75■□□□□ 0.43
CCDC7-203ENST00000362006 COPG2Q9UBF2 871 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CCDC163A0A0D9SF12 145 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 C17orf113A0A1B0GUU1 675 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 SRRM3A6NNA2 597 aaPredicted RBP17.75■□□□□ 0.43
CCDC7-203ENST00000362006 K7ESF4 209 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CHUKO15111 745 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 AXIN1O15169 862 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 NUAK1O60285 661 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 TSPAN12O95859 305 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 BPGMP07738 259 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 TFEBP19484 476 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 TAC1P20366 129 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 KELP23276 732 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 GLRBP48167 497 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CTSCP53634 463 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 PDK4Q16654 411 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 USP39Q53GS9 565 aaKnown RBP17.75■□□□□ 0.43
CCDC7-203ENST00000362006 TECRLQ5HYJ1 363 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 SLC36A4Q6YBV0 504 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 ISCA2Q86U28 154 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 NUDCD3Q8IVD9 361 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 MYO1HQ8N1T3 1032 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 SPATA6LQ8N4H0 392 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 CADM4Q8NFZ8 388 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 RAB3IL1Q8TBN0 382 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 STAG3L4Q8TBR4 150 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 ELMO1Q92556 727 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 FOXJ1Q92949 421 aa17.75■□□□□ 0.43
CCDC7-203ENST00000362006 PLXND1Q9Y4D7 1925 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 SHOX2O60902 331 aaPredicted RBP17.74■□□□□ 0.43
CCDC7-203ENST00000362006 FSBPO95073 299 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 IGHV4-34P06331 123 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 MYL2P10916 166 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 NEFHP12036 1026 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 ZNF8P17098 575 aaPredicted RBP17.74■□□□□ 0.43
CCDC7-203ENST00000362006 PRKAA2P54646 552 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 KIAA1024LP59773 190 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 YPEL5P62699 121 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 IRX4P78413 519 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 PLOD1Q02809 727 aaPredicted RBP17.74■□□□□ 0.43
CCDC7-203ENST00000362006 GBX1Q14549 363 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 NEK10Q6ZWH5 1172 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 TRAPPC5Q8IUR0 188 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC7-203ENST00000362006 TMEM151AQ8N4L1 468 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 CCDC126Q96EE4 140 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 LGR4Q9BXB1 951 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 XPR1Q9UBH6 696 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 MBD1Q9UIS9 605 aaPredicted RBP17.74■□□□□ 0.43
CCDC7-203ENST00000362006 OR1A2Q9Y585 309 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 COL6A3P12111 3177 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 TARM1B6A8C7 271 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 ZBTB14O43829 449 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 LILRB5O75023 590 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 ASPHQ12797 758 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 TTC19Q6DKK2 380 aaPredicted RBP17.74■□□□□ 0.43
CCDC7-203ENST00000362006 ZYG11AQ6WRX3 759 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 RGS9BPQ6ZS82 235 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 NAT14Q8WUY8 206 aa17.74■□□□□ 0.43
CCDC7-203ENST00000362006 RLN3Q8WXF3 142 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms