RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CDC42P60953 191 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 RHDQ02161 417 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 CHIT1Q13231 466 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 ADGRF1Q5T601 910 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 KRT73Q86Y46 540 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 AMER2Q8N7J2 671 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 RAB23Q9ULC3 237 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 VPS4AQ9UN37 437 aa16.15■□□□□ 0.18
SCAF1-201ENST00000360565 BHMG1C9JSJ3 638 aaPredicted RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 DHRS4L1P0CG22 281 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 SLC6A2P23975 617 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 GCAP28676 217 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 ECT2LQ008S8 904 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 NIPAL4Q0D2K0 466 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 NADK2Q4G0N4 442 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 SULT1C3Q6IMI6 304 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 CRTC3Q6UUV7 619 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 EIF3MQ7L2H7 374 aaKnown RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 TMPRSS11BQ86T26 416 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PDSS2Q86YH6 399 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 RAVER1Q8IY67 606 aaKnown RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 QRFPRQ96P65 431 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 FAM83DQ9H4H8 585 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PTTG2Q9NZH5 202 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 LRP5O75197 1615 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 GON4LQ3T8J9 2241 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 USP54Q70EL1 1684 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 DNAJC25-GNG10A0A024R161 153 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 BCAS2O75934 225 aaPredicted RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PFKMP08237 780 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 CCDC159P0C7I6 412 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 COL6A1P12109 1028 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PPM1AP35813 382 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 FBXW4P57775 412 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 SPIBQ01892 262 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PRKCQQ04759 706 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PPP1R3AQ16821 1122 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 SMYD5Q6GMV2 418 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 CLDN19Q8N6F1 224 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 ZNF599Q96NL3 588 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 KCNA7Q96RP8 456 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PNMA8CA0A1B0GUJ8 204 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 FAM234BA2RU67 622 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PTGESO14684 152 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 MYL12BO14950 172 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 ALDH1A2O94788 518 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 NADKO95544 446 aaPredicted RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 LRRC73Q5JTD7 316 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 TRIM40Q6P9F5 258 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 PLD4Q96BZ4 506 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 RBM4BQ9BQ04 359 aaKnown RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 RBM4Q9BWF3 364 aaKnown RBP16.14■□□□□ 0.17
SCAF1-201ENST00000360565 LRRC3Q9BY71 257 aa16.14■□□□□ 0.17
SCAF1-201ENST00000360565 KRT75O95678 551 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ALPIP09923 528 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 IGFBP5P24593 272 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 DGKQP52824 942 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CDH15P55291 814 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 UPP1Q16831 310 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 HIPK1Q86Z02 1210 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 FBXO27Q8NI29 283 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 SLC7A5P2Q9GIP4 190 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 C1orf109Q9NX04 203 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 SUCOQ9UBS9 1254 aaKnown RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CA12O43570 354 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CYP7B1O75881 506 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 MYL12AP19105 171 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 TIMM50Q3ZCQ8 353 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 PHF21AQ96BD5 680 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 SCLYQ96I15 445 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 C8orf48Q96LL4 319 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 MAGEB10Q96LZ2 347 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 PDP1Q9P0J1 537 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 SDHDO14521 159 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ARPC2O15144 300 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 SNNO75324 88 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 TULP3O75386 442 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 HAPLN1P10915 354 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 GSK3BP49841 420 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 MERTKQ12866 999 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 RFTN1Q14699 578 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 DGKKQ5KSL6 1271 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CYP20A1Q6UW02 462 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 LYSMD3Q7Z3D4 306 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CEP97Q8IW35 865 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 AHI1Q8N157 1196 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 TCAIMQ8N3R3 496 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 PYCR2Q96C36 320 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 PPCDCQ96CD2 204 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 NOL6Q9H6R4 1146 aaKnown RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ABCB10Q9NRK6 738 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CORO2BQ9UQ03 480 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ANGPT4Q9Y264 503 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ILVBLA1L0T0 632 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 H3BM21 787 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 FPGTO14772 594 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 GRM6O15303 877 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms