RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 KPNA3O00505 521 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF197O14709 1029 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GRID2O43424 1007 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DCXO43602 365 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ATP6V1G2O95670 118 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GUCA1CO95843 209 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CISD3P0C7P0 127 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 MTHFD2P13995 350 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GFAPP14136 432 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PKMP14618 531 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 NQO1P15559 274 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 OGNP20774 298 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CES1P23141 567 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CCND1P24385 295 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ATP5F1P24539 256 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GRK2P25098 689 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DDX6P26196 483 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 HOXA9P31269 272 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SERPINB5P36952 375 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ETV3P41162 512 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FOXA1P55317 472 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ELF3P78545 371 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GSTM4Q03013 218 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 HYAL1Q12794 435 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 NFATC2Q13469 925 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PPP1R3AQ16821 1122 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GAB4Q2WGN9 574 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ATP13A5Q4VNC0 1218 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SPDYAQ5MJ70 313 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 COL13A1Q5TAT6 717 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GRAMD4Q6IC98 578 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 KLC3Q6P597 504 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SYCE2Q6PIF2 218 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SCIMPQ6UWF3 145 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 GDPD4Q6W3E5 623 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 MBOAT1Q6ZNC8 495 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 Q6ZVL8 140 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 HSD11B1LQ7Z5J1 315 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 LONP2Q86WA8 852 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PELI3Q8N2H9 469 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 BEND7Q8N7W2 519 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF454Q8N9F8 522 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SCAIQ8N9R8 606 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CD200R1Q8TD46 325 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FRS2Q8WU20 508 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 WDR60Q8WVS4 1066 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SCG3Q8WXD2 468 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PBXIP1Q96AQ6 731 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CLIP3Q96DZ5 547 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PTCD3Q96EY7 689 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 TSPAN17Q96FV3 270 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CLPTM1LQ96KA5 538 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 SAMD11Q96NU1 681 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CATSPER2Q96P56 530 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 MYADMQ96S97 322 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 DRC3Q9H069 523 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 ILKAPQ9H0C8 392 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 WWP1Q9H0M0 922 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CDH19Q9H159 772 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 MAGEE1Q9HCI5 957 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FBRSL1Q9HCM7 1045 aaKnown RBP5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FKBP14Q9NWM8 211 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 TAS2R13Q9NYV9 303 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 CRLS1Q9UJA2 301 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 PACSIN3Q9UKS6 424 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 FADS3Q9Y5Q0 445 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 WASF2Q9Y6W5 498 aa5.03□□□□□ -1.6
ATXN3-202ENST00000359366 WDFY4Q6ZS81 3184 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PLXNB3Q9ULL4 1909 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 LRRK1Q38SD2 2015 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CFAP73A6NFT4 308 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 C9JVG2 144 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ECI2O75521 394 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 IPO13O94829 963 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SORBS2O94875 1100 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 POP4O95707 220 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TSPAN12O95859 305 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 HNRNPCP07910 306 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 C1SP09871 688 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ESRRAP11474 423 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 COL6A2P12110 1019 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 FCARP24071 287 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PRDX3P30048 256 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 RECQLP46063 649 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 TTPAP49638 278 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 RPL14P50914 215 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 HK3P52790 923 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 MTTPP55157 894 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 NME5P56597 212 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 CACNG1Q06432 222 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ACAP2Q15057 778 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 NDUFA5Q16718 116 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 KHDC1Q4VXA5 237 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 FNDC3BQ53EP0 1204 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 UNC50Q53HI1 259 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 PTRHD1Q6GMV3 140 aaKnown RBP5.02□□□□□ -1.61
ATXN3-202ENST00000359366 UGT3A1Q6NUS8 523 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 SERPINA13PQ6UXR4 307 aa5.02□□□□□ -1.61
ATXN3-202ENST00000359366 ASRGL1Q7L266 308 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms