RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 HMGXB4Q9UGU5 601 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ASB3Q9Y575 518 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 NRXN3Q9Y4C0 1643 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 DLG5Q8TDM6 1919 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 NT5C1B-RDH14C9J2C7 533 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 E9PAM4 449 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PDCD5O14737 125 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 IFNW1P05000 195 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 RHOQP17081 205 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 RPL22P35268 128 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GABRB2P47870 512 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ARRB1P49407 418 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 WNT3AP56704 352 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TRAP1Q12931 704 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PHF19Q5T6S3 580 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 FBXW8Q8N3Y1 598 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 COX18Q8N8Q8 333 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 FAM13CQ8NE31 585 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TTLQ8NG68 377 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PMEPA1Q969W9 287 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ABCG8Q9H221 673 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ANXA2P2A6NMY6 339 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PLK4O00444 970 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 OR1F1O43749 312 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TRIM3O75382 744 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CLDN9O95484 217 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 SEC24AO95486 1093 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ANXA2P07355 339 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 KIR3DL1P43629 444 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 MAXP61244 160 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 SLC25A52Q3SY17 297 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 HECTD2Q5U5R9 776 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 SLC30A8Q8IWU4 369 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ZMIZ2Q8NF64 920 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CPNE2Q96FN4 548 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TRMOQ9BU70 441 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 SEMA4AQ9H3S1 761 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 NXF3Q9H4D5 531 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 FAM124BQ9H5Z6 455 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 DNAJC18Q9H819 358 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF490Q9ULM2 529 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 YDJCA8MPS7 323 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CDK14O94921 469 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 RENP00797 406 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PIRTP0C851 137 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 POU5F1Q01860 360 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CYP4F3Q08477 520 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 FUT10Q6P4F1 479 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 VGLL2Q8N8G2 317 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 RFKQ969G6 155 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GAL3ST3Q96A11 431 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 WDR26Q9H7D7 661 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ZDHHC18Q9NUE0 388 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GRIP1Q9Y3R0 1128 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 FAM234BA2RU67 622 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PRMT5O14744 637 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PSMD10O75832 226 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PRAMEF1O95521 474 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ITGA2BP08514 1039 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PTDSS1P48651 473 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 QPCTQ16769 361 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CERS6Q6ZMG9 384 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 C1orf186Q6ZWK4 172 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 RELL1Q8IUW5 271 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ALDH16A1Q8IZ83 802 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 DNAJB14Q8TBM8 379 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PIWIL2Q8TC59 973 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 S100ZQ8WXG8 99 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 RNF157Q96PX1 679 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TCF12Q99081 682 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 LRTM1Q9HBL6 345 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ANKHQ9HCJ1 492 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 SNX15Q9NRS6 342 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PNPLA3Q9NST1 481 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 MAN2B2Q9Y2E5 1009 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 MED31Q9Y3C7 131 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 A0A1B0GVM2 712 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TCAF2A6NFQ2 919 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 PSMG1O95456 288 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 BRCC3P46736 316 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GNPDA1P46926 289 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GMFBP60983 142 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CRADDP78560 199 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GPM6BQ13491 265 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 AAGABQ6PD74 315 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 C15orf52Q6ZUT6 534 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 DNAJB7Q7Z6W7 309 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CUZD1Q86UP6 607 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF227Q86WZ6 799 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TMEM145Q8NBT3 493 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TMEM161BQ8NDZ6 487 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 TRPM4Q8TD43 1214 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 BRSK1Q8TDC3 778 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 APOLD1Q96LR9 279 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 MGME1Q9BQP7 344 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 GLOD4Q9HC38 313 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 STOML2Q9UJZ1 356 aa5.48□□□□□ -1.53
PTPRD-202ENST00000356435 SETD1AO15047 1707 aaKnown RBP5.48□□□□□ -1.53
PTPRD-202ENST00000356435 CPED1A4D0V7 1026 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms