RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RGS7P49802 495 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 YBX1P67809 324 aaKnown RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 IRF3Q14653 427 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 SMAD1Q15797 465 aaKnown RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 ARMC4Q5T2S8 1044 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 TIGD7Q6NT04 549 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 SCARA5Q6ZMJ2 495 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 TLK2Q86UE8 772 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 CLEC10AQ8IUN9 316 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 ZNF557Q8N988 423 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 SLC22A8Q8TCC7 542 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 STYXQ8WUJ0 223 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 RNF157Q96PX1 679 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 IER2Q9BTL4 223 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 WDR18Q9BV38 432 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 UGT2B28Q9BY64 529 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 ERVK13-1Q9NX77 482 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 ZNF224Q9NZL3 707 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 RIMKLBQ9ULI2 386 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 KLHL20Q9Y2M5 609 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 LOC100130705A0A1B0GUX0 176 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 ANGPTL1O95841 491 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 MT-ND2P03891 347 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 NCK1P16333 377 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 GSK3BP49841 420 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CDH6P55285 790 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 ERVK-21P61565 698 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 AANATQ16613 207 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 ZACNQ401N2 412 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 SETMARQ53H47 684 aaPredicted RBP15.56■□□□□ 0.08
RTN3-205ENST00000356000 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 PHC2Q8IXK0 858 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 PM20D2Q8IYS1 436 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 WDTC1Q8N5D0 677 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CERS2Q96G23 380 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 B3GALT6Q96L58 329 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 C1QTNF1Q9BXJ1 281 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 TMEM168Q9H0V1 697 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 IFT46Q9NQC8 304 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 FAM49BQ9NUQ9 324 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 ABT1Q9ULW3 272 aaKnown RBP15.56■□□□□ 0.08
RTN3-205ENST00000356000 USP18Q9UMW8 372 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 TPRKBQ9Y3C4 175 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 TARM1B6A8C7 271 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 AIREO43918 545 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 DLX3O60479 287 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CCNYL3P0C7X3 344 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 HLA-DMAP28067 261 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CAPRIN1Q14444 709 aaKnown RBP15.56■□□□□ 0.08
RTN3-205ENST00000356000 TRIP4Q15650 581 aaPredicted RBP15.56■□□□□ 0.08
RTN3-205ENST00000356000 STRA8Q7Z7C7 330 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 ZDHHC13Q8IUH4 622 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 GPALPP1Q8IXQ4 340 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 OR8H2Q8N162 312 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CCNYL1Q8N7R7 359 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CNIH3Q8TBE1 160 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 INTS12Q96CB8 462 aaKnown RBP15.56■□□□□ 0.08
RTN3-205ENST00000356000 NECTIN4Q96NY8 510 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 NAT9Q9BTE0 207 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 SMURF2Q9HAU4 748 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 CYP3A43Q9HB55 503 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 LRRC4Q9HBW1 653 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 USE1Q9NZ43 259 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 ELF5Q9UKW6 265 aaPredicted RBP15.56■□□□□ 0.08
RTN3-205ENST00000356000 DAGLAQ9Y4D2 1042 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 HSPB11Q9Y547 144 aa15.56■□□□□ 0.08
RTN3-205ENST00000356000 FAM92AA1XBS5 289 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 OR2A25A4D2G3 310 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 KATNA1O75449 491 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 OLFM2O95897 454 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 ITGB6P18564 788 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 GPX3P22352 226 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 MGAT1P26572 445 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 IL18R1Q13478 541 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 KCNC3Q14003 757 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 CNSTQ6PJW8 725 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 ZNF704Q6ZNC4 412 aaPredicted RBP15.55■□□□□ 0.08
RTN3-205ENST00000356000 OR8H1Q8NGG4 311 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 AKAP1Q92667 903 aaKnown RBP eCLIP15.55■□□□□ 0.083e-8■■■■□ 20.2
RTN3-205ENST00000356000 MMP28Q9H239 520 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 OR51B5Q9H339 312 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 SLC35C2Q9NQQ7 365 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 BFARQ9NZS9 450 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 FZD1Q9UP38 647 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 CACNG2Q9Y698 323 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 COL4A5P29400 1685 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 RGS5O15539 181 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 SUPT7LO94864 414 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 FADS2O95864 444 aaKnown RBP15.55■□□□□ 0.08
RTN3-205ENST00000356000 GSTO1P78417 241 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 FOXM1Q08050 763 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 SCRN3Q0VDG4 424 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 CACHD1Q5VU97 1274 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 ZNF470Q6ECI4 717 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 OR8K5Q8NH50 307 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 TMEM125Q96AQ2 219 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 PDLIM5Q96HC4 596 aaKnown RBP15.55■□□□□ 0.08
RTN3-205ENST00000356000 CAPNS2Q96L46 248 aa15.55■□□□□ 0.08
RTN3-205ENST00000356000 TRNT1Q96Q11 434 aaKnown RBP15.55■□□□□ 0.08
RTN3-205ENST00000356000 SPATA9Q9BWV2 254 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms