RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 FAM83HQ6ZRV2 1179 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 LILRA3Q8N6C8 439 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 LPGAT1Q92604 370 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 PHACTR1Q9C0D0 580 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 DPEP2Q9H4A9 486 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 NLGN3Q9NZ94 848 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 GULP1Q9UBP9 304 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 TBC1D29Q9UFV1 150 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 FBXO5Q9UKT4 447 aa17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 CDV3Q9UKY7 258 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-202ENST00000355841 B4DGG1 531 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 FLRT2O43155 660 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 OGNP20774 298 aaKnown RBP17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 FMO4P31512 558 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 ERCC6LQ2NKX8 1250 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 BCL7AQ4VC05 210 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 TEDDM1Q5T9Z0 273 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 AMZ2Q86W34 360 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 DEFB124Q8NES8 71 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 OR4C6Q8NH72 309 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 LKAAEAR1Q8TD35 194 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 PATE1Q8WXA2 126 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 FAM136AQ96C01 138 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 ZNF514Q96K75 400 aaPredicted RBP17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 FAM167BQ9BTA0 163 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 P2RY12Q9H244 342 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 VPS37BQ9H9H4 285 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 PRDM8Q9NQV8 689 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 MOCS1Q9NZB8 636 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 PCOLCE2Q9UKZ9 415 aa17.58■□□□□ 0.41
PDLIM7-202ENST00000355841 TRBV23OR9-2A0A075B6M9 112 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 TCRBV9S1A1TA0A576 114 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 DYNC1I1O14576 645 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 PRMT5O14744 637 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 HAUS5O94927 633 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 RPL10P27635 214 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 GABRB3P28472 473 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 CNSTQ6PJW8 725 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 SPNS2Q8IVW8 549 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 KRT222Q8N1A0 295 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 CALML6Q8TD86 181 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 UBXN4Q92575 508 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 BIRC8Q96P09 236 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 TCF12Q99081 682 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 TIMM29Q9BSF4 260 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 SMYD2Q9NRG4 433 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 NINJ2Q9NZG7 142 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 PSAT1Q9Y617 370 aa17.58■□□□□ 0.4
PDLIM7-202ENST00000355841 DCHS1Q96JQ0 3298 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 ARID1BQ8NFD5 2236 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 CXorf49A8MYA2 514 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 CBFA2T3O75081 653 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 AP2A2O94973 939 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 TRIM16O95361 564 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 MGAT5Q09328 741 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 NAA30Q147X3 362 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 BRD3Q15059 726 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 CTSL3PQ5NE16 218 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 RNF187Q5TA31 235 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 PTRHD1Q6GMV3 140 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 XKR5Q6UX68 686 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 PIP4P1Q86T03 277 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 CFAP206Q8IYR0 622 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 C2CD4AQ8NCU7 369 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 SCG3Q8WXD2 468 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 CCM2Q9BSQ5 444 aa17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-202ENST00000355841 MGAT4DA6NG13 374 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 TPP1O14773 563 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 SLC30A4O14863 429 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 TM4SF5O14894 197 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 ACSL3O95573 720 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 OR56A5P0C7T3 313 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 ALPPL2P10696 532 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 VSNL1P62760 191 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 FRG1Q14331 258 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 C6orf132Q5T0Z8 1188 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 ZNF549Q6P9A3 640 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 CNTN4Q8IWV2 1026 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 SLC35F3Q8IY50 421 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 KYQ8NBH2 561 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 OR2L2Q8NH16 312 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 FBF1Q8TES7 1133 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 ZDHHC1Q8WTX9 485 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 APOLD1Q96LR9 279 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 INTS10Q9NVR2 710 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 ZFATQ9P243 1243 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 PSMD13Q9UNM6 376 aa17.56■□□□□ 0.4
PDLIM7-202ENST00000355841 UQCRHLA0A096LP55 91 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 PRR19A6NJB7 356 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 PDZK1P1A8MUH7 402 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 PFDN6O15212 129 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 AHSGP02765 367 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 UQCRHP07919 91 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 VCLP18206 1134 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 CSE1LP55060 971 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 DNAJC3Q13217 504 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 EFTUD2Q15029 972 aaKnown RBP eCLIP17.55■□□□□ 0.49e-7■■■■■ 31.7
PDLIM7-202ENST00000355841 INAVAQ3KP66 663 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 ZCCHC8Q6NZY4 707 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms