RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ZSCAN5AQ9BUG6 496 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 CATSPERBQ9H7T0 1116 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 IL37Q9NZH6 218 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 E9PAM4 449 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 HAS3O00219 553 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 TSPAN4O14817 238 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 AXIN1O15169 862 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 CNTN5O94779 1100 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 HAPLN1P10915 354 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 IL10P22301 178 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 FASP25445 335 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 THPOP40225 353 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 KCNC1P48547 511 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 PURAQ00577 322 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 KIF19Q2TAC6 998 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 FUT11Q495W5 492 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 CST9Q5W186 159 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 RGMBQ6NW40 437 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 PIWIL4Q7Z3Z4 852 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 EPHX4Q8IUS5 362 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 PLD3Q8IV08 490 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SFRP1Q8N474 314 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 CPSF7Q8N684 471 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 ESX1Q8N693 406 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 BLOC1S5Q8TDH9 187 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 ASB9Q96DX5 294 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 HHIPL1Q96JK4 782 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 B3GALT6Q96L58 329 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 ZC4H2Q9NQZ6 224 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 ENTPD7Q9NQZ7 604 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 MARCH4Q9P2E8 410 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 B3GNT3Q9Y2A9 372 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 HS3ST4Q9Y661 456 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 TRPC5OSA6NMA1 111 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 ZNF701M0R085 212 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 MRASO14807 208 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SOAT2O75908 522 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SIX3O95343 332 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 CHRNA1P02708 482 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SLC7A1P30825 629 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 NCS1P62166 190 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 EPS8Q12929 822 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 CYP51A1Q16850 503 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SLC39A12Q504Y0 691 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SPPL2BQ8TCT7 592 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SEPT8Q92599 483 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 DPF3Q92784 378 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 DHRS12A0PJE2 317 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SLCO1B7G3V0H7 640 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 PSMD3O43242 534 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SSX4O60224 188 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SRP72O76094 671 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 IPO13O94829 963 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 SLC10A3P09131 477 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 CES1P23141 567 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 HTR1BP28222 390 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 CD40LGP29965 261 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 GRK4P32298 578 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SERPINH1P50454 418 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 ZNF157P51786 506 aaPredicted RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 GPLD1P80108 840 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 EFEMP1Q12805 493 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 ALFQ53S48 1182 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 HECTD2Q5U5R9 776 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 AGAP9Q5VTM2 703 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 R3HCC1LQ7Z5L2 792 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 DCP2Q8IU60 420 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 C2CD4AQ8NCU7 369 aaPredicted RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 OR13F1Q8NGS4 319 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 HMCESQ96FZ2 354 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SP110Q9HB58 689 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 IGSF5Q9NSI5 407 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 FKBP14Q9NWM8 211 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 OSER1Q9NX31 292 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 NEU3Q9UQ49 428 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 TRPV2Q9Y5S1 764 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 MAGED1Q9Y5V3 778 aaPredicted RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 KRT87PA6NCN2 255 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 M0QX08 132 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 AP3D1O14617 1153 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 MTRF1O75570 445 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 KCNK2O95069 426 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 ALX3O95076 343 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 LTA4HP09960 611 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 PRSS56P0CW18 603 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 MYF6P23409 242 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 IL12AP29459 219 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 OXTRP30559 389 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 GALK2Q01415 458 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 PSMD5Q16401 504 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 RANBP10Q6VN20 620 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SCD5Q86SK9 330 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 SLC22A15Q8IZD6 547 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 HMGCLL1Q8TB92 370 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 PSMG2Q969U7 264 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms