RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 OR4A15Q8NGL6 344 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CLHC1Q8NHS4 586 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 SIKE1Q9BRV8 207 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 KLHL25Q9H0H3 589 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 NOL11Q9H8H0 719 aaKnown RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 SLCO3A1Q9UIG8 710 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 POLR3HQ9Y535 204 aaPredicted RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 STON1Q9Y6Q2 735 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 ANKRD36CQ5JPF3 1778 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 OR51F1A6NGY5 319 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 TSPAN6O43657 245 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 SEMA4FO95754 770 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 GNAZP19086 355 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CPN2P22792 545 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 HOXD13P35453 343 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 SLC9A5Q14940 896 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 PUS10Q3MIT2 529 aaKnown RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 ZNF542PQ5EBM4 170 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 GCNT7Q6ZNI0 430 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 DENND6AQ8IWF6 608 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 RNF148Q8N7C7 305 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 ATP6V1C2Q8NEY4 427 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 PIWIL2Q8TC59 973 aaKnown RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 ATOH1Q92858 354 aaPredicted RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 HHIPQ96QV1 700 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 KCNK4Q9NYG8 393 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CORO1CQ9ULV4 474 aaPredicted RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 LINC01553A4QN01 128 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 HIDE1A8MVS5 230 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 M0QZQ0 153 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 FCHO1O14526 889 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 NPC1O15118 1278 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 AXIN1O15169 862 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CCNYL3P0C7X3 344 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 ATP1B2P14415 290 aaPredicted RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 JUPP14923 745 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CALB2P22676 271 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 RBMS1P29558 406 aaKnown RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 NRLP54845 237 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 HNRNPH2P55795 449 aaKnown RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 SERINC3Q13530 473 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CST6Q15828 149 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 SULT1C3Q6IMI6 304 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 CASP12Q6UXS9 341 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 MYLIPQ8WY64 445 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 TFGQ92734 400 aaPredicted RBP9.6□□□□□ -0.87
GABPA-201ENST00000354828 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 HIC2Q96JB3 615 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 SERTAD3Q9UJW9 196 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 GPR34Q9UPC5 381 aa9.6□□□□□ -0.87
GABPA-201ENST00000354828 TMEM265A0A087WTH1 108 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 RFXANKO14593 260 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 SHBGP04278 402 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 FGFR3P22607 806 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 RPL4P36578 427 aaKnown RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 BNC1Q01954 994 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 SLC1A5Q15758 541 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 TRIM74Q86UV6 250 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 TRIM69Q86WT6 500 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 TMEM126BQ8IUX1 230 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 SCUBE1Q8IWY4 988 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 ROGDIQ9GZN7 287 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 INTS10Q9NVR2 710 aaKnown RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 AP3D1O14617 1153 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 GABRDO14764 452 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 UBXN7O94888 489 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 CYP11A1P05108 521 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 PAICSP22234 425 aaKnown RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 RXRGP48443 463 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 DEPDC1Q5TB30 811 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 ANKRD22Q5VYY1 191 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 TMEM26Q6ZUK4 368 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 C10orf107Q8IVU9 208 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 PGM2Q96G03 612 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 OXNAD1Q96HP4 312 aaPredicted RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 CDKN2AIPNLQ96HQ2 116 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 LRIG1Q96JA1 1093 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 ZNF641Q96N77 438 aaPredicted RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 OR52E6Q96RD3 313 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 AP3M1Q9Y2T2 418 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 RAP2CQ9Y3L5 183 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 SIN3BO75182 1162 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 SRPRAP08240 638 aaKnown RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 ANXA4P09525 319 aaPredicted RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 ZNF24P17028 368 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 ERVFC1P60507 584 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 USP46P62068 366 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 ARHGAP40Q5TG30 622 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 EMC10Q5UCC4 262 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 ZNF598Q86UK7 904 aaKnown RBP9.59□□□□□ -0.87
GABPA-201ENST00000354828 DHFR2Q86XF0 187 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 C1orf74Q96LT6 269 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 RNF145Q96MT1 663 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 TUBGCP5Q96RT8 1024 aa9.59□□□□□ -0.87
GABPA-201ENST00000354828 MIPEPQ99797 713 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms