RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 H0Y626 953 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 H3BNH8 94 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 PSMD3O43242 534 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 F7P08709 466 aaPredicted RBP10.01□□□□□ -0.81
SYNE1-203ENST00000354674 ABHD2P08910 425 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 DBTP11182 482 aaKnown RBP10.01□□□□□ -0.81
SYNE1-203ENST00000354674 FCARP24071 287 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 PPP2R2BQ00005 443 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 SNX31Q8N9S9 440 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 HCAR2Q8TDS4 363 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 SMARCD2Q92925 531 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 IRF7Q92985 503 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 LRRC39Q96DD0 335 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 IMP4Q96G21 291 aaKnown RBP10.01□□□□□ -0.81
SYNE1-203ENST00000354674 CCDC120Q96HB5 630 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 KLHL32Q96NJ5 620 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF717Q9BY31 904 aaPredicted RBP10.01□□□□□ -0.81
SYNE1-203ENST00000354674 SPHK2Q9NRA0 654 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 CLEC4EQ9ULY5 219 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 SATB2Q9UPW6 733 aa10.01□□□□□ -0.81
SYNE1-203ENST00000354674 SLC9A3R1O14745 358 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 DLGAP3O95886 979 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MMP2P08253 660 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 POU6F2P78424 691 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 SLC12A1Q13621 1099 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 TRIM25Q14258 630 aaKnown RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 PON2Q15165 354 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 SLC14A2Q15849 920 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 SPDYAQ5MJ70 313 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ADGRG6Q86SQ4 1221 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 TMEM25Q86YD3 366 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ACDQ96AP0 544 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MSLNLQ96KJ4 702 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 SIGLEC10Q96LC7 697 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 LINC00597Q9H2U6 94 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ATP13A1Q9HD20 1204 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 CASS4Q9NQ75 786 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ABCB10Q9NRK6 738 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 KCNK4Q9NYG8 393 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 AAR2Q9Y312 384 aaKnown RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 HOXC11O43248 304 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 IDH3BO43837 385 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 CYBBP04839 570 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 INHBAP08476 426 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MATN1P21941 496 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 GLDCP23378 1020 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ADRA1AP35348 466 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 LTBRP36941 435 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 GRIA1P42261 906 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ALDH3B2P48448 385 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ARF5P84085 180 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 PIGFQ07326 219 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 PRPSAP1Q14558 356 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MROH9Q5TGP6 573 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 IL31Q6EBC2 164 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 BORAQ6PGQ7 559 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 DHRS4L2Q6PKH6 230 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 TPGS1Q6ZTW0 290 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 KIAA0907Q7Z7F0 614 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 AKAP14Q86UN6 197 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 BEND7Q8N7W2 519 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 DCAF4L2Q8NA75 395 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 GALNT6Q8NCL4 622 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ARRDC2Q8TBH0 407 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MGME1Q9BQP7 344 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 LRRC40Q9H9A6 602 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 C20orf96Q9NUD7 363 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 ADA2Q9NZK5 511 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 FBXO10Q9UK96 956 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 H0Y858 1186 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 ANXA9O76027 345 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 PRDX6P30041 224 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 CSKP41240 450 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 HK2P52789 917 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 NIPAL4Q0D2K0 466 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 CDH18Q13634 790 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 IHHQ14623 411 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 GRIN2CQ14957 1233 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MOGQ16653 247 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 INO80DQ53TQ3 878 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 PAGE2BQ5JRK9 111 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 KDELC1Q6UW63 502 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 SPATC1Q76KD6 591 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 IGDCC3Q8IVU1 814 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 PABPC5Q96DU9 382 aaKnown RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 PSKH2Q96QS6 385 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 DGCR6LQ9BY27 220 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 PRRG3Q9BZD7 231 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MUC3BQ9H195 1237 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 MAGEE1Q9HCI5 957 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 UBA2Q9UBT2 640 aaPredicted RBP10□□□□□ -0.81
SYNE1-203ENST00000354674 GNPTGQ9UJJ9 305 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 CDH7Q9ULB5 785 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 PMF1-BGLAPU3KQ54 211 aa10□□□□□ -0.81
SYNE1-203ENST00000354674 F5H423 210 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 MUSKO15146 869 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 NADKO95544 446 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 ATF4P18848 351 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 PRKAA2P54646 552 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 GEMP55040 296 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms