RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 BEND7Q8N7W2 519 aaPredicted RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 ZNF781Q8N8C0 355 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 RASGEF1AQ8N9B8 481 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 OR14C36Q8NHC7 312 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 AGR3Q8TD06 166 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 SIPA1Q96FS4 1042 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 SHCBP1LQ9BZQ2 653 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 CD248Q9HCU0 757 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 NCF1BA6NI72 391 aaPredicted RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 NCF1CA8MVU1 366 aaPredicted RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 SGTAO43765 313 aa20.22■□□□□ 0.83
TRIM4-202ENST00000354241 NCF1P14598 390 aaPredicted RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 IMPDH1P20839 514 aa20.22■□□□□ 0.83
TRIM4-202ENST00000354241 HNRNPH2P55795 449 aaKnown RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 BOP1Q14137 746 aaKnown RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 MLF2Q15773 248 aaPredicted RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 TTC31Q49AM3 519 aaPredicted RBP20.22■□□□□ 0.83
TRIM4-202ENST00000354241 FRA10AC1Q70Z53 315 aa20.22■□□□□ 0.83
TRIM4-202ENST00000354241 KLHL42Q9P2K6 505 aa20.22■□□□□ 0.83
TRIM4-202ENST00000354241 PRUNE2Q8WUY3 3088 aa20.22■□□□□ 0.83
TRIM4-202ENST00000354241 LOC730098B7Z3J9 87 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 QSOX1O00391 747 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 FTH1P02794 183 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 PCCBP05166 539 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 MPSTP25325 297 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 AOAHP28039 575 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CTSCP53634 463 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 AQP5P55064 265 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ZNF678Q5SXM1 525 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 GPR153Q6NV75 609 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 TMEM92Q6UXU6 159 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 RPS27LQ71UM5 84 aaKnown RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 NLRP8Q86W28 1048 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 PLA2G15Q8NCC3 412 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ELMO1Q92556 727 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 L3HYPDHQ96EM0 354 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CNDP1Q96KN2 507 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ILKAPQ9H0C8 392 aaPredicted RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ABCF3Q9NUQ8 709 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 UTP6Q9NYH9 597 aaKnown RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CA14Q9ULX7 337 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 RAP2CQ9Y3L5 183 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 DOCK9Q9BZ29 2069 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CCDC189A1A4V9 331 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CCT8L1PA6NM43 557 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 MAN2B1O00754 1011 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 PLRG1O43660 514 aaKnown RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CBSLP0DN79 551 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CBSP35520 551 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 SERPINB5P36952 375 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 HERVK_113P63132 956 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 HSPA14Q0VDF9 509 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CRY1Q16526 586 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 KIAA1324Q6UXG2 1013 aaKnown RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 TRPM8Q7Z2W7 1104 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ADAMTSL2Q86TH1 951 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 LSMEM2Q8N112 164 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ERVK-6Q9BXR3 956 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 FAM126AQ9BYI3 521 aaPredicted RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ZCCHC2Q9C0B9 1178 aaKnown RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 KCNK4Q9NYG8 393 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 CD274Q9NZQ7 290 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 FAM8A1Q9UBU6 413 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 MMP17Q9ULZ9 603 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 SCML1Q9UN30 329 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 DUSP12Q9UNI6 340 aa20.21■□□□□ 0.83
TRIM4-202ENST00000354241 ZFR2Q9UPR6 939 aaKnown RBP20.21■□□□□ 0.83
TRIM4-202ENST00000354241 SNX2O60749 519 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 SUPT7LO94864 414 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 ACADMP11310 421 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 HK3P52790 923 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 PUS10Q3MIT2 529 aaKnown RBP20.2■□□□□ 0.82
TRIM4-202ENST00000354241 HSF5Q4G112 596 aaPredicted RBP20.2■□□□□ 0.82
TRIM4-202ENST00000354241 TMEM220Q6QAJ8 160 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 KLK6Q92876 244 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 LENG8Q96PV6 779 aaPredicted RBP20.2■□□□□ 0.82
TRIM4-202ENST00000354241 OSBPL6Q9BZF3 934 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 NCKAP1Q9Y2A7 1128 aa20.2■□□□□ 0.82
TRIM4-202ENST00000354241 TCRBV21S2A2A0A5A6 115 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 KPNA5O15131 536 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 ATG13O75143 517 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 KIAA0754O94854 1291 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 CDK14O94921 469 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 SIX3O95343 332 aaPredicted RBP20.19■□□□□ 0.82
TRIM4-202ENST00000354241 ADPRHP54922 357 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 ZBTB16Q05516 673 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 PRKAA1Q13131 559 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 TGFBIQ15582 683 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 WSCD2Q2TBF2 565 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 UNC50Q53HI1 259 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 PLEKHS1Q5SXH7 462 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 CYHR1Q6ZMK1 362 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 FRMD7Q6ZUT3 714 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 FAM124AQ86V42 546 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 FAM131CQ96AQ9 280 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 MRGPRX1Q96LB2 322 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 OR2AG1Q9H205 316 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 GSTO2Q9H4Y5 243 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 ADAMTS6Q9UKP5 1117 aa20.19■□□□□ 0.82
TRIM4-202ENST00000354241 LRRC14BA6NHZ5 514 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms