RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PPM1MQ96MI6 270 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 EFHD1Q9BUP0 239 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 MFSD1Q9H3U5 465 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 NSUN3Q9H649 340 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 KIAA1522Q9P206 1035 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 CROTQ9UKG9 612 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 PRPF19Q9UMS4 504 aaKnown RBP10.28□□□□□ -0.76
SMPD4-201ENST00000351288 NDUFAF1Q9Y375 327 aa10.28□□□□□ -0.76
SMPD4-201ENST00000351288 TRPM7Q96QT4 1865 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 PLK4O00444 970 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 TRIM38O00635 465 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 GSNP06396 782 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 COL6A2P12110 1019 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 CD1DP15813 335 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 EEF1B2P24534 225 aaKnown RBP10.27□□□□□ -0.76
SMPD4-201ENST00000351288 STC1P52823 247 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 ACAP2Q15057 778 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF284Q2VY69 593 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 ATP6AP1LQ52LC2 224 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 FAM26DQ5JW98 314 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 SERPINA13PQ6UXR4 307 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 CHST15Q7LFX5 561 aaPredicted RBP10.27□□□□□ -0.76
SMPD4-201ENST00000351288 RD3Q7Z3Z2 195 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 SPRED2Q7Z698 418 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 SYTL1Q8IYJ3 562 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 CLYBLQ8N0X4 340 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 PLD4Q96BZ4 506 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 COPS8Q99627 209 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 TMEM79Q9BSE2 394 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 OPTCQ9UBM4 332 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.76
SMPD4-201ENST00000351288 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 LEFTY2O00292 366 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 KDELR3O43731 214 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 NPHS1O60500 1241 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 E2F6O75461 281 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 BCAS2O75934 225 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 CAPN1P07384 714 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 ABCB1P08183 1280 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 PRDX6P30041 224 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 OXTRP30559 389 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 HNF4AP41235 474 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 LRP8Q14114 963 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TTLL9Q3SXZ7 439 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 MPPE1Q53F39 396 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 DPY19L3Q6ZPD9 716 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 USP45Q70EL2 814 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 OFCC1Q8IZS5 231 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 PELI3Q8N2H9 469 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 SLCO4A1Q96BD0 722 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TMEM175Q9BSA9 504 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 ELOVL6Q9H5J4 265 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 ELAC1Q9H777 363 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 PRKAB1Q9Y478 270 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 ZFC3H1O60293 1989 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 H3BSA7 217 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 AGRPO00253 132 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 RAD51BO15315 384 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 FOXD2O60548 495 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 ESRRBO95718 433 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TFAP2AP05549 437 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 MTHFD2P13995 350 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 ZNF37AP17032 561 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 MSH3P20585 1137 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 HTR7P34969 479 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 IRX1P78414 480 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 SLC44A4Q53GD3 710 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 CWF19L1Q69YN2 538 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 Q6ZVL8 140 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 GALNT15Q8N3T1 639 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 CPSF7Q8N684 471 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 OR56A4Q8NGH8 313 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 PTCD2Q8WV60 388 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TOP1MTQ969P6 601 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TSSK3Q96PN8 268 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TDRD1Q9BXT4 1180 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 SPAG4Q9NPE6 437 aa10.27□□□□□ -0.77
SMPD4-201ENST00000351288 TDRKHQ9Y2W6 561 aaKnown RBP10.27□□□□□ -0.77
SMPD4-201ENST00000351288 NME4O00746 187 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 AHCYL1O43865 530 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 SMIM18P0DKX4 95 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 COL6A1P12109 1028 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 TYRP14679 529 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 EPCAMP16422 314 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 LBPP18428 481 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 IMPDH1P20839 514 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 ERVFC1P60507 584 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 ARF5P84085 180 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 RING1Q06587 406 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 TAF1AQ15573 450 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-201ENST00000351288 PLEKHG6Q3KR16 790 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 ARSIQ5FYB1 569 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 TPGS2Q68CL5 300 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 SLC8B1Q6J4K2 584 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 GPRIN3Q6ZVF9 776 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 ANKRD46Q86W74 232 aa10.26□□□□□ -0.77
SMPD4-201ENST00000351288 SLC44A2Q8IWA5 706 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-201ENST00000351288 DOCK4Q8N1I0 1966 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms