RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 INPP4BO15327 924 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 NARSO43776 548 aaKnown RBP18.39■□□□□ 0.53
PTN-201ENST00000348225 SNX2O60749 519 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 PCDH8O95206 1070 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 ALOX15P16050 662 aaPredicted RBP18.39■□□□□ 0.53
PTN-201ENST00000348225 AOAHP28039 575 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 TAS2R38P59533 333 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 ZBTB16Q05516 673 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 GALNT1Q10472 559 aaPredicted RBP18.39■□□□□ 0.53
PTN-201ENST00000348225 TDGQ13569 410 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 PFKFB4Q16877 469 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 ACSBG2Q5FVE4 666 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 EOGTQ5NDL2 527 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 PLEKHS1Q5SXH7 462 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 ATG14Q6ZNE5 492 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 FRMD7Q6ZUT3 714 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 FAM3CQ92520 227 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 ASB2Q96Q27 587 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 FAM126AQ9BYI3 521 aaPredicted RBP18.39■□□□□ 0.53
PTN-201ENST00000348225 FBXL12Q9NXK8 326 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 STX16-NPEPL1H3BU86 382 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 STX16O14662 325 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 SUPT7LO94864 414 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 SOD1P00441 154 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 S100BP04271 92 aaPredicted RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 MPSTP25325 297 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 CCR7P32248 378 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 RPL14P50914 215 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 SFSWAPQ12872 951 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 TMEM115Q12893 351 aaPredicted RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 TTC31Q49AM3 519 aaPredicted RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 KHDC1Q4VXA5 237 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 PTCRAQ6ISU1 281 aaPredicted RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 TMPRSS6Q8IU80 811 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 LSMEM2Q8N112 164 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 AFAP1L2Q8N4X5 818 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 MKRN2Q9H000 416 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 DNAJC28Q9NX36 388 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 CD274Q9NZQ7 290 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 F5P12259 2224 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 RAD51BO15315 384 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 KLK8O60259 260 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 ATG13O75143 517 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 COL9A1P20849 921 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 ALDH18A1P54886 795 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 PUS10Q3MIT2 529 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 SLC44A4Q53GD3 710 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 GPR153Q6NV75 609 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 Q7L0L9 218 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 FITM2Q8N6M3 262 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 ELMO1Q92556 727 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 FAM131CQ96AQ9 280 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 MOCOSQ96EN8 888 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 GSTO2Q9H4Y5 243 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 EPHX3Q9H6B9 360 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 ACSS2Q9NR19 701 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 HEY2Q9UBP5 337 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 VTI1BQ9UEU0 232 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 SERGEFQ9UGK8 458 aa18.38■□□□□ 0.53
PTN-201ENST00000348225 TSR3Q9UJK0 312 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 CNOT6Q9ULM6 557 aaKnown RBP18.38■□□□□ 0.53
PTN-201ENST00000348225 ATG2BQ96BY7 2078 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 IGLON5A6NGN9 336 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 MAN2B1O00754 1011 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 PRLHRP49683 370 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 GTF2H3Q13889 308 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 BOP1Q14137 746 aaKnown RBP18.37■□□□□ 0.53
PTN-201ENST00000348225 GBX1Q14549 363 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 AGERQ15109 404 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 TGFBIQ15582 683 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 UNC50Q53HI1 259 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 ZNF648Q5T619 568 aaPredicted RBP18.37■□□□□ 0.53
PTN-201ENST00000348225 IER5LQ5T953 404 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 KIAA1161Q6NSJ0 714 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 SBSNQ6UWP8 590 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 RASGEF1AQ8N9B8 481 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 RPLP0P6Q8NHW5 317 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 ASZ1Q8WWH4 475 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 APOBEC2Q9Y235 224 aaKnown RBP18.37■□□□□ 0.53
PTN-201ENST00000348225 OARD1Q9Y530 152 aa18.37■□□□□ 0.53
PTN-201ENST00000348225 EYSQ5T1H1 3165 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 OR2AG2A6NM03 316 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 K7ESM1 405 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 PLRG1O43660 514 aaKnown RBP18.36■□□□□ 0.53
PTN-201ENST00000348225 SGTAO43765 313 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 NUAK1O60285 661 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 MPC1LP0DKB6 136 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 EEF1DP29692 281 aaKnown RBP18.36■□□□□ 0.53
PTN-201ENST00000348225 CCR10P46092 362 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 RPS21P63220 83 aaKnown RBP18.36■□□□□ 0.53
PTN-201ENST00000348225 HSPA14Q0VDF9 509 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 CCINQ13939 588 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 SYTL3Q4VX76 610 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 PRPF38BQ5VTL8 546 aaKnown RBP18.36■□□□□ 0.53
PTN-201ENST00000348225 SEL1L3Q68CR1 1132 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 ANKS6Q68DC2 871 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 ADAMTSL4Q6UY14 1074 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 KBTBD6Q86V97 674 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 AGR3Q8TD06 166 aa18.36■□□□□ 0.53
PTN-201ENST00000348225 ERP27Q96DN0 273 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms