RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PLA2G4EQ3MJ16 856 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 FUT11Q495W5 492 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TIGD2Q4W5G0 525 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 IRAK1BP1Q5VVH5 260 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 IFNEQ86WN2 208 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 FNDC5Q8NAU1 212 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TSPEARQ8WU66 669 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 SEZ6LQ9BYH1 1024 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ACTL8Q9H568 366 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ZFYVE1Q9HBF4 777 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 INTS7Q9NVH2 962 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 DUS2Q9NX74 493 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ELOVL2Q9NXB9 296 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 NUDT4Q9NZJ9 180 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ACTR3BQ9P1U1 418 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 C1orf232A0A0U1RR37 186 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 DHRS12A0PJE2 317 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 AQP12BA6NM10 295 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TAPBPO15533 448 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 SYNCRIPO60506 623 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TNFAIP8O95379 198 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 LATS1O95835 1130 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TRBC1P01850 177 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 CNPP09543 421 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 HNF1BP35680 557 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 GSK3BP49841 420 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 POLR2JP52435 117 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 AP1S1P61966 158 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 CYP4F8P98187 520 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 CREB5Q02930 508 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 NFATC2Q13469 925 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 PCBP2Q15366 365 aaKnown RBP eCLIP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 PDCD4Q53EL6 469 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 EPHX4Q8IUS5 362 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 AQP12AQ8IXF9 295 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TMEM199Q8N511 208 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ANKFN1Q8N957 763 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 OR4F6Q8NGB9 312 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TMEM169Q96HH4 297 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 EFHD1Q9BUP0 239 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TRIM54Q9BYV2 358 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 TNKS2Q9H2K2 1166 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ASB8Q9H765 288 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 DOCK6Q96HP0 2047 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 CCDC154A6NI56 674 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 GIPC1O14908 333 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 FFAR2O15552 330 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 HTRA2O43464 458 aaPredicted RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 KATNA1O75449 491 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 GUCA1CO95843 209 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 NCK1P16333 377 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 PSMC3P17980 439 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 NELFEP18615 380 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 CASP2P42575 452 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 IRX1P78414 480 aaPredicted RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 TXNL4AP83876 142 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 FOXM1Q08050 763 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 APOFQ13790 326 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 TBCELQ5QJ74 424 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 PTRHD1Q6GMV3 140 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 CERS6Q6ZMG9 384 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 GAREM2Q75VX8 874 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 EFL1Q7Z2Z2 1120 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 CARM1Q86X55 608 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 FAM217AQ8IXS0 508 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 TCEAL8Q8IYN2 117 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 ADGRG5Q8IZF4 528 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 METTL6Q8TCB7 284 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 DIS3LQ8TF46 1054 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 DDI1Q8WTU0 396 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 CLPBQ9H078 707 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 ALG2Q9H553 416 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 ARHGAP10A1A4S6 786 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 DLGAP1O14490 977 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 TPST1O60507 370 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 RSL1D1O76021 490 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 BPIP17213 487 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 ARL1P40616 181 aaPredicted RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 GDF5P43026 501 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 RPL5P46777 297 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 HSPA7P48741 367 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 EPHB3P54753 998 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 LIPEQ05469 1076 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 BNIP2Q12982 314 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 GTF2H2Q13888 395 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 PHKG1Q16816 387 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 NADK2Q4G0N4 442 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 HABP4Q5JVS0 413 aaKnown RBP15.22■□□□□ 0.03
UPF3B-202ENST00000345865 DGKKQ5KSL6 1271 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 PPP4R4Q6NUP7 873 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 GTF2H2CQ6P1K8 395 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 SLC2A7Q6PXP3 512 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 IL27RAQ6UWB1 636 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 ZBTB49Q6ZSB9 765 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 FRA10AC1Q70Z53 315 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 ADAMTSL2Q86TH1 951 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 TSPAN33Q86UF1 283 aa15.22■□□□□ 0.03
UPF3B-202ENST00000345865 BBS7Q8IWZ6 715 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms