RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TCEAL4Q96EI5 215 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 RBM18Q96H35 190 aaKnown RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 TUBG2Q9NRH3 451 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 SNTG1Q9NSN8 517 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 A8MVJ9 347 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 H7C417 338 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ADH6P28332 368 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ELOAQ14241 798 aaKnown RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 UBQLN2Q9UHD9 624 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 RIMKLBQ9ULI2 386 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 USP51Q70EK9 711 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF101Q8IZC7 436 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ZKSCAN4Q969J2 545 aaPredicted RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 S100A16Q96FQ6 103 aaKnown RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF570Q96NI8 536 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 HACL1Q9UJ83 578 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 PRKAB1Q9Y478 270 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 WDR62O43379 1518 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ASGR1P07306 291 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.393e-7■■□□□ 12.8
SMAD4-201ENST00000342988 TMEM86AQ8N2M4 240 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 C12orf50Q8NA57 414 aaPredicted RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 FAM47BQ8NA70 645 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 FBXO25Q8TCJ0 367 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 AUTS2Q8WXX7 1259 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 MCMBPQ9BTE3 642 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 SERINC1Q9NRX5 453 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF225Q9UK10 706 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 SLC22A1O15245 554 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 FGF19O95750 216 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 ZNF16P17020 682 aaPredicted RBP17.46■□□□□ 0.39
SMAD4-201ENST00000342988 AHSA2Q719I0 299 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 GPR65Q8IYL9 337 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 NODALQ96S42 347 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 NDUFAF4Q9P032 175 aa17.46■□□□□ 0.39
SMAD4-201ENST00000342988 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
SMAD4-201ENST00000342988 PALLDQ8WX93 1383 aa17.46■□□□□ 0.38
SMAD4-201ENST00000342988 CHKAP35790 457 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 GLP1RP43220 463 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CDH11P55287 796 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 FADS3Q9Y5Q0 445 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 ATP6AP2A0A1C7CYW4 349 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 TP73O15350 636 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 TGM6O95932 706 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
SMAD4-201ENST00000342988 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 SULT4A1Q9BR01 284 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 FBXO43Q4G163 708 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 FOXRED2Q8IWF2 684 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 ACBD4Q8NC06 268 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 TIFAQ96CG3 184 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CERS2Q96G23 380 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 POPDC2Q9HBU9 364 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 MARCH2Q9P0N8 246 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 ADAM18Q9Y3Q7 739 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 HEBP2Q9Y5Z4 205 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 PZPP20742 1482 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 KIF13AQ9H1H9 1805 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 FXYD6-FXYD2A0A087WZ82 144 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CLN5O75503 358 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 FAM171A1Q5VUB5 890 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 OR2T12Q8NG77 320 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CPB2Q96IY4 423 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 FXYD6Q9H0Q3 95 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 PARPBPQ9NWS1 579 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 UMODL1Q5DID0 1318 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 APOC4-APOC2K7ER74 178 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 APOC2P02655 101 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 MAGEA11P43364 429 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 ERVK-9P63128 1117 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 WSCD2Q2TBF2 565 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 UNQ6126/PRO20091Q6UXV3 157 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 ERVK-18Q9QC07 812 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CCRL2O00421 344 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 AVPR1BP47901 424 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CRTC2Q53ET0 693 aaPredicted RBP17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CASTOR2A6NHX0 329 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 IFNA5P01569 189 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 CTHP32929 405 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 YAP1P46937 504 aaKnown RBP17.45■□□□□ 0.38
SMAD4-201ENST00000342988 DCDC5Q6ZRR9 648 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 SLC22A15Q8IZD6 547 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 KLHL36Q8N4N3 616 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 TSPAN16Q9UKR8 245 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 NR2E1Q9Y466 385 aa17.45■□□□□ 0.38
SMAD4-201ENST00000342988 ECT2LQ008S8 904 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 DNASE1L3Q13609 305 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 SMARCD3Q6STE5 483 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF808Q8N4W9 903 aaPredicted RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CCDC120Q96HB5 630 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 MFSD14AQ96MC6 490 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CCL15-CCL14A0A0B4J2E2 113 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 C13orf42A0A1B0GVH6 325 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 NOTOA8MTQ0 251 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 UGT2B10P36537 528 aa17.44■□□□□ 0.38
SMAD4-201ENST00000342988 NAA30Q147X3 362 aaPredicted RBP17.44■□□□□ 0.38
SMAD4-201ENST00000342988 CCL15Q16663 113 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms