RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 LONRF1Q17RB8 773 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 KIAA0930Q6ICG6 404 aaPredicted RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 CENPUQ71F23 418 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 C11orf96Q7Z7L8 435 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 JPH3Q8WXH2 748 aaPredicted RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 ART4Q93070 314 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 ATXN7L3BQ96GX2 97 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 SARS2Q9NP81 518 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 DLL3Q9NYJ7 618 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 SCHIP1Q9P0W5 487 aaPredicted RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 U3KQA8 63 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 USP1O94782 785 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 TOP3BO95985 862 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 FMO4P31512 558 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 SLC1A2P43004 574 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 CARSP49589 748 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 PUM1Q14671 1186 aaKnown RBP eCLIP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 PERM1Q5SV97 790 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 UBAP2Q5T6F2 1119 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 NEPROQ6NW34 567 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 ZCCHC8Q6NZY4 707 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 DUS1LQ6P1R4 473 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 EFL1Q7Z2Z2 1120 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 DGLUCYQ7Z3D6 616 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 TMEM135Q86UB9 458 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 SLCO6A1Q86UG4 719 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 AMZ2Q86W34 360 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 CFAP206Q8IYR0 622 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 IFI44Q8TCB0 444 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 DUSP23Q9BVJ7 150 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 RIMKLBQ9ULI2 386 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 WDR37Q9Y2I8 494 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 TEX264Q9Y6I9 313 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 ANKRD12Q6UB98 2062 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 AGAP14A8MT82 685 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 NOBOXO60393 691 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 FTH1P19P0C7X4 201 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 SSTR1P30872 391 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 CLCNKAP51800 687 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 NR0B2Q15466 257 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 PTRHD1Q6GMV3 140 aaKnown RBP12.98□□□□□ -0.33
TUBD1-202ENST00000340993 MRNIPQ6NTE8 343 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 DHRS13Q6UX07 377 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 NAGSQ8N159 534 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 ARL10Q8N8L6 244 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
TUBD1-202ENST00000340993 BAHD1Q8TBE0 780 aaPredicted RBP12.98□□□□□ -0.33
TUBD1-202ENST00000340993 PYROXD1Q8WU10 500 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 ELMO1Q92556 727 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 RMI1Q9H9A7 625 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 RABGEF1Q9UJ41 708 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 CSNK1G3Q9Y6M4 447 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 NCOR2Q9Y618 2525 aa12.98□□□□□ -0.33
TUBD1-202ENST00000340993 AKAP13Q12802 2813 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 MAGEB16A2A368 324 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 TNFSF14O43557 240 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 SPINK2P20155 84 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 NSG1P42857 185 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 MAPK9P45984 424 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PRLHRP49683 370 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PGGT1BP53609 377 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 FOXC1Q12948 553 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 LRP8Q14114 963 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 KIF26BQ2KJY2 2108 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 AARS2Q5JTZ9 985 aaKnown RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 SDCCAG8Q86SQ7 713 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CILP2Q8IUL8 1156 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 DTX3LQ8TDB6 740 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 SLC37A2Q8TED4 501 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PEX13Q92968 403 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CCDC74AQ96AQ1 378 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 MRRFQ96E11 262 aaKnown RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 TTC1Q99614 292 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 WWP1Q9H0M0 922 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 L2HGDHQ9H9P8 463 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 TOR4AQ9NXH8 423 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PADI4Q9UM07 663 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 RNF215Q9Y6U7 377 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 COL5A1P20908 1838 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 IGLV3-16A0A075B6K0 115 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CEACAM1P13688 526 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CKMT2P17540 419 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 VCLP18206 1134 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
TUBD1-202ENST00000340993 SDHBP21912 280 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PSMA3P25788 255 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 PDHA2P29803 388 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 ALDH4A1P30038 563 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 TTPAP49638 278 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 CLCA4Q14CN2 919 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 AMZ1Q400G9 498 aa12.97□□□□□ -0.33
TUBD1-202ENST00000340993 SYTL3Q4VX76 610 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms