RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 DCNP07585 359 aaKnown RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 SLC7A9P82251 487 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 AZIN2Q96A70 460 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 BTBD9Q96Q07 612 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 PNO1Q9NRX1 252 aaKnown RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 PLK4O00444 970 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 CYP17A1P05093 508 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 PGDP52209 483 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 TPD52L3Q96J77 140 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 CDX2Q99626 313 aaPredicted RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 KLHL25Q9H0H3 589 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 HRASLS2Q9NWW9 162 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 HEY2Q9UBP5 337 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 TCRBV9S1A1TA0A576 114 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 SCN2BO60939 215 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 TFPIP10646 304 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 SLC6A11P48066 632 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 HSPA7P48741 367 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 CCR8P51685 355 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 CLCN4P51793 760 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 DSC1Q08554 894 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 INO80DQ53TQ3 878 aaPredicted RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 NAPRTQ6XQN6 538 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 OR2T34Q8NGX1 318 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 ZNF563Q8TA94 476 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 HCAR2Q8TDS4 363 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 KCTD14Q9BQ13 255 aaPredicted RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 ADAM21Q9UKJ8 722 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
LIN54-201ENST00000340417 PRAMEF26H0Y7S4 382 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 MYO1CO00159 1063 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 GABRDO14764 452 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 PIK3R1P27986 724 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 CHRNB3Q05901 458 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 ARHGAP36Q6ZRI8 547 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 KRT84Q9NSB2 600 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 HCN2Q9UL51 889 aa12.66□□□□□ -0.38
LIN54-201ENST00000340417 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 LRATO95237 230 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 KRT75O95678 551 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 PAFAH1B3Q15102 231 aaKnown RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 DUPD1Q68J44 220 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 KIAA0408Q6ZU52 694 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 HTR3DQ70Z44 454 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 CMC1Q7Z7K0 106 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 CAMKVQ8NCB2 501 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ACMSDQ8TDX5 336 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ZNF490Q9ULM2 529 aaPredicted RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 IPO13O94829 963 aaKnown RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 CLDN9O95484 217 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 HOXD8P13378 290 aaPredicted RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 POLR2CP19387 275 aaPredicted RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 CPN2P22792 545 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 BROXQ5VW32 411 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 SULT1C3Q6IMI6 304 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 TGM7Q96PF1 710 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 GFM1Q96RP9 751 aaKnown RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 IL21RQ9HBE5 538 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 EQTNQ9NQ60 294 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 EIF2B3Q9NR50 452 aaKnown RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 DDX18Q9NVP1 670 aaKnown RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 VPS4AQ9UN37 437 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 PCDHGB3Q9Y5G1 929 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 GMFGO60234 142 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 PIAS1O75925 651 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ADRB3P13945 408 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 PREPP48147 710 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 CHIT1Q13231 466 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 NCEH1Q6PIU2 408 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 CRTC1Q6UUV9 634 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 LRRC15Q8TF66 581 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ART4Q93070 314 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 MIPEPQ99797 713 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 KLF16Q9BXK1 252 aaPredicted RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ADPRHL2Q9NX46 363 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 C19orf25Q9UFG5 118 aaPredicted RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 VEGFDO43915 354 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 IL12BP29460 328 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 GALNT2Q10471 571 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 TMEM115Q12893 351 aaPredicted RBP12.65□□□□□ -0.38
LIN54-201ENST00000340417 RNF43Q68DV7 783 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 HM13Q8TCT9 377 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 FIG4Q92562 907 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 ACSL5Q9ULC5 683 aa12.65□□□□□ -0.38
LIN54-201ENST00000340417 HNRNPRO43390 633 aaKnown RBP12.65□□□□□ -0.39
LIN54-201ENST00000340417 C6P13671 934 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 POLD2P49005 469 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 MAPK12P53778 367 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 GRIN2CQ14957 1233 aa12.65□□□□□ -0.39
LIN54-201ENST00000340417 ZC3H7AQ8IWR0 971 aaKnown RBP12.65□□□□□ -0.39
LIN54-201ENST00000340417 RDH11Q8TC12 318 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms