RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 RRNAD1Q96FB5 475 aaKnown RBP12.52□□□□□ -0.41
BRPF3-201ENST00000339717 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
BRPF3-201ENST00000339717 IL37Q9NZH6 218 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 AXIN2Q9Y2T1 843 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 IGSF1Q8N6C5 1336 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 NPIPA7E9PJI5 369 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 SLC28A1O00337 649 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 SHOXO15266 292 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 HPRP00739 348 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 NPIPA8P0DM63 369 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 HSD17B2P37059 387 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
BRPF3-201ENST00000339717 RGS1Q08116 209 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 SELENBP1Q13228 472 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 PWP1Q13610 501 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 GRK1Q15835 563 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 LRRC55Q6ZSA7 311 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 LAPTM4BQ86VI4 370 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 CLRN3Q8NCR9 226 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 DCAKDQ8WVC6 231 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 ZNF518BQ9C0D4 1074 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.41
BRPF3-201ENST00000339717 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 TMEM181Q9P2C4 612 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 NDRG3Q9UGV2 375 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 CLTCL1P53675 1640 aa12.52□□□□□ -0.41
BRPF3-201ENST00000339717 HCN1O60741 890 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ZNF35P13682 527 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 JUNDP17535 347 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PAICSP22234 425 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ACSL1P33121 698 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 HADHBP55084 474 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 POU4F2Q12837 409 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 GRIK5Q16478 980 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ASTE1Q2TB18 679 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ZCCHC12Q6PEW1 402 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PTCHD4Q6ZW05 846 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 SIAH1Q8IUQ4 282 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 CCDC117Q8IWD4 279 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 YIPF7Q8N8F6 280 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ZFAND1Q8TCF1 268 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 COL21A1Q96P44 957 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 TCF7L1Q9HCS4 588 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 IL1RAPQ9NPH3 570 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 EIF2B4Q9UI10 523 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 HEMK1Q9Y5R4 338 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 KDM6BO15054 1643 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ANKRD63C9JTQ0 380 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 CHST10O43529 356 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 BUD23O43709 281 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PLIN3O60664 434 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ECHS1P30084 290 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PCP4P48539 62 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 CTBP2P56545 445 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PRKCDQ05655 676 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 GFOD2Q3B7J2 385 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 OR2T12Q8NG77 320 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 FOPNLQ96NB1 174 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 RANGRFQ9HD47 186 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 MID1IP1Q9NPA3 183 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 WWOXQ9NZC7 414 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PCDHGB2Q9Y5G2 931 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 LOC100130705A0A1B0GUX0 176 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 TYROBPO43914 113 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 MRPS14O60783 128 aaKnown RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 CSHL1Q14406 222 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 UBE2SQ16763 222 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 SMIM5Q71RC9 77 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PIH1D2Q8WWB5 315 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 CPT1BQ92523 772 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 KCTD7Q96MP8 289 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ANKEF1Q9NU02 776 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 SPASTQ9UBP0 616 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 ZNF98A6NK75 572 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 M0QYV0 167 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 KLRC4O43908 158 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 AKAP3O75969 853 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 IL7RP16871 459 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 FMO3P31513 532 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 KCTD19Q17RG1 926 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 TRIM54Q9BYV2 358 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 KRCC1Q9NPI7 259 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 FNIP2Q9P278 1114 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 COMMD3Q9UBI1 195 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 RNF112Q9ULX5 631 aa12.51□□□□□ -0.41
BRPF3-201ENST00000339717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-201ENST00000339717 PROM1O43490 865 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms