RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 SLC32A1Q9H598 525 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 IARS2Q9NSE4 1012 aaKnown RBP16.45■□□□□ 0.22
SFN-201ENST00000339276 FAM8A1Q9UBU6 413 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 PIKFYVEQ9Y2I7 2098 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 LY6G6EA0A0G2JKS1 128 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 UBA6A0AVT1 1052 aaPredicted RBP16.45■□□□□ 0.22
SFN-201ENST00000339276 GIPC1O14908 333 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 SNX2O60749 519 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 SLC1A2P43004 574 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 CLCNKAP51800 687 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 DNAJC3Q13217 504 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 CTBP1Q13363 440 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 NFE2L1Q14494 772 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 FAM83HQ6ZRV2 1179 aaPredicted RBP16.45■□□□□ 0.22
SFN-201ENST00000339276 FAM181AQ8N9Y4 354 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 GSDMBQ8TAX9 411 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 ZDHHC1Q8WTX9 485 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 PATE1Q8WXA2 126 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 LPGAT1Q92604 370 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
SFN-201ENST00000339276 C9orf72Q96LT7 481 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 FAM167BQ9BTA0 163 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 P2RY12Q9H244 342 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 SLC17A6Q9P2U8 582 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 GULP1Q9UBP9 304 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 TBC1D29Q9UFV1 150 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 MTRF1LQ9UGC7 380 aaKnown RBP16.45■□□□□ 0.22
SFN-201ENST00000339276 DNMT3AQ9Y6K1 912 aaPredicted RBP16.45■□□□□ 0.22
SFN-201ENST00000339276 U3KQA8 63 aa16.45■□□□□ 0.22
SFN-201ENST00000339276 A6NCN8 305 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 MGAT4DA6NG13 374 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 PRMT5O14744 637 aaPredicted RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 NOBOXO60393 691 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 SLU7O95391 586 aaKnown RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 VCLP18206 1134 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 SSTR1P30872 391 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 MAGEA4P43358 317 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 NOVA1P51513 510 aaKnown RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 EIF3BP55884 814 aaKnown RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 MPP1Q00013 466 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 DMPKQ09013 629 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 CUL1Q13616 776 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 TRIP6Q15654 476 aaKnown RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 SEPT7Q16181 437 aaKnown RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 RNF187Q5TA31 235 aaPredicted RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 PALM2Q8IXS6 379 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 LMNTD2Q8IXW0 634 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 IFT20Q8IY31 132 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 NAGSQ8N159 534 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 LILRA3Q8N6C8 439 aaPredicted RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 ARL10Q8N8L6 244 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 OR2L2Q8NH16 312 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 LKAAEAR1Q8TD35 194 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 CALML6Q8TD86 181 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 TCF12Q99081 682 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 FMO2Q99518 471 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 CDC6Q99741 560 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 PPANQ9NQ55 473 aaKnown RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 PRDM8Q9NQV8 689 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 FBXO6Q9NRD1 293 aaPredicted RBP16.44■□□□□ 0.22
SFN-201ENST00000339276 NFU1Q9UMS0 254 aa16.44■□□□□ 0.22
SFN-201ENST00000339276 SPAARA0A1B0GVQ0 90 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 QSOX1O00391 747 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 KCNK5O95279 499 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 S1PR4O95977 384 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 OR56A5P0C7T3 313 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 RPS3P23396 243 aaKnown RBP eCLIP16.43■□□□□ 0.22
SFN-201ENST00000339276 MAZP56270 477 aaKnown RBP16.43■□□□□ 0.22
SFN-201ENST00000339276 GPX6P59796 221 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 DAB2P98082 770 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 FRG1Q14331 258 aaKnown RBP16.43■□□□□ 0.22
SFN-201ENST00000339276 NR0B2Q15466 257 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 ZNF658BQ4V348 819 aaPredicted RBP16.43■□□□□ 0.22
SFN-201ENST00000339276 CTSL3PQ5NE16 218 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 OGFOD3Q6PK18 319 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 GPR156Q8NFN8 814 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 HM13Q8TCT9 377 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 CCM2Q9BSQ5 444 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 INTS10Q9NVR2 710 aaKnown RBP16.43■□□□□ 0.22
SFN-201ENST00000339276 GNPTGQ9UJJ9 305 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 FBXO5Q9UKT4 447 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 CRYL1Q9Y2S2 319 aa16.43■□□□□ 0.22
SFN-201ENST00000339276 TRBV23OR9-2A0A075B6M9 112 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 IQCF5A8MTL0 148 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 PDZK1P1A8MUH7 402 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 PFDN6O15212 129 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 TNFSF14O43557 240 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 KCNJ13O60928 360 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 FTH1P02794 183 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 CKMT1AP12532 417 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 CEACAM1P13688 526 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 F3P13726 295 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 CKMT2P17540 419 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 ITGB6P18564 788 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 IDSP22304 550 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 KCNA4P22459 653 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 RPL10P27635 214 aaKnown RBP16.42■□□□□ 0.22
SFN-201ENST00000339276 FMO4P31512 558 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms