RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HJURPQ8NCD3 748 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 C2orf15Q8WU43 125 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 ASIC4Q96FT7 647 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 HHIPL1Q96JK4 782 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 PAK6Q9NQU5 681 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 NDUFAF1Q9Y375 327 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 TRIM43BA6NCK2 446 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 PRMT5O14744 637 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 PER2O15055 1255 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 ZNF821O75541 412 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 FGF18O76093 207 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 LRG1P02750 347 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 CYBBP04839 570 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 RPS17P08708 135 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 WDR5P61964 334 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 RPL38P63173 70 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 RFTN2Q52LD8 501 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 SBSNQ6UWP8 590 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 EP400NLQ6ZTU2 488 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 RBM23Q86U06 439 aaKnown RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 DHFR2Q86XF0 187 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 RNF168Q8IYW5 571 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 SFRP1Q8N474 314 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 TMEM102Q8N9M5 508 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 FATE1Q969F0 183 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 TRIM43Q96BQ3 446 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 ASB9Q96DX5 294 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 FAR2Q96K12 515 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 IPPKQ9H8X2 491 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 SPG21Q9NZD8 308 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 CXXC1Q9P0U4 656 aaPredicted RBP8.73□□□□□ -1.01
SNCA-201ENST00000336904 KLQ9UEF7 1012 aa8.73□□□□□ -1.01
SNCA-201ENST00000336904 LEFTY2O00292 366 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 SOCS2O14508 198 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 OR7A17O14581 309 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CLGNO14967 610 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CXCL14O95715 111 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CXCL10P02778 98 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GNAO1P09471 354 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 HSPA1AP0DMV8 641 aaKnown RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 HSPA1BP0DMV9 641 aaKnown RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 LHCGRP22888 699 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CDH15P55291 814 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ERVFC1P60507 584 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TNK2Q07912 1038 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 NFATC2Q13469 925 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 HERC3Q15034 1050 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CPSF6Q16630 551 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNCA-201ENST00000336904 ATP13A5Q4VNC0 1218 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 DPY19L3Q6ZPD9 716 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 Q6ZSR9 355 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CHST9Q7L1S5 443 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 VRK3Q8IV63 474 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 KRTCAP2Q8N6L1 136 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 SPDYE1Q8NFV5 336 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 CDC26Q8NHZ8 85 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 MRPS31Q92665 395 aaKnown RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 NMD3Q96D46 503 aaKnown RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 MYRFLQ96LU7 910 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 CDK5RAP1Q96SZ6 601 aaKnown RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 RNF11Q9Y3C5 154 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ATG2BQ96BY7 2078 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GLYATL1P3A0A0U1RQE8 302 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 PRSS51A0A1B0GVH4 220 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 OR2AG2A6NM03 316 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 PLK4O00444 970 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TAPBPO15533 448 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 FFAR2O15552 330 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 LRATO95237 230 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 EFEMP2O95967 443 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 SLC6A2P23975 617 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 HMGCLP35914 325 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 NFKB2Q00653 900 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 PLOD1Q02809 727 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 MESP2Q0VG99 397 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 SMARCB1Q12824 385 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TSTA3Q13630 321 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 PLEKHG6Q3KR16 790 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GTDC1Q4AE62 458 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ANKRD46Q86W74 232 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 KIAA2013Q8IYS2 634 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 LILRA3Q8N6C8 439 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 RHEBL1Q8TAI7 183 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 AURKBQ96GD4 344 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 TSC22D3Q99576 134 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TBCDQ9BTW9 1192 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 WWOXQ9NZC7 414 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 THEGQ9P2T0 379 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 EPS15L1Q9UBC2 864 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ANGPTL3Q9Y5C1 460 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 MAGED1Q9Y5V3 778 aaPredicted RBP8.72□□□□□ -1.01
SNCA-201ENST00000336904 WNT6Q9Y6F9 365 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 FZD6O60353 706 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 ESRRBO95718 433 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 TRBC1P01850 177 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 GSNP06396 782 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 SRCP12931 536 aa8.72□□□□□ -1.01
SNCA-201ENST00000336904 SLC2A4P14672 509 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms