RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 METTL6Q8TCB7 284 aa23.09■■□□□ 1.29
NDEL1-201ENST00000334527 CYGBQ8WWM9 190 aa23.09■■□□□ 1.29
NDEL1-201ENST00000334527 HBEGFQ99075 208 aa23.09■■□□□ 1.29
NDEL1-201ENST00000334527 EI24O14681 340 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 OR1D2P34982 312 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 TUFMP49411 452 aaKnown RBP23.08■■□□□ 1.29
NDEL1-201ENST00000334527 EMX2Q04743 252 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 LPCAT2Q7L5N7 544 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 STK40Q8N2I9 435 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 OVCA2Q8WZ82 227 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 PCDHB9Q9Y5E1 797 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 SLC30A1Q9Y6M5 507 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 V9GYQ6 96 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 KANSL1LA0AUZ9 987 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 TBKBP1A7MCY6 615 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 MT-ND1P03886 318 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 ENO2P09104 434 aaPredicted RBP23.08■■□□□ 1.29
NDEL1-201ENST00000334527 UMPSP11172 480 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 CDK9P50750 372 aaKnown RBP23.08■■□□□ 1.29
NDEL1-201ENST00000334527 CACNG1Q06432 222 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 GOLGA7Q7Z5G4 137 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 ARHGAP22Q7Z5H3 698 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 TBC1D21Q8IYX1 336 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 PAPD5Q8NDF8 572 aaKnown RBP23.08■■□□□ 1.29
NDEL1-201ENST00000334527 TNIP2Q8NFZ5 429 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 LRRC3Q9BY71 257 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 RNF38Q9H0F5 515 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 RPF2Q9H7B2 306 aaKnown RBP23.08■■□□□ 1.29
NDEL1-201ENST00000334527 IL17CQ9P0M4 197 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 LHX3Q9UBR4 397 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 DHRS7Q9Y394 339 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 ZNF711Q9Y462 761 aa23.08■■□□□ 1.29
NDEL1-201ENST00000334527 ANKRD33BA6NCL7 494 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 SEC24DO94855 1032 aaPredicted RBP23.07■■□□□ 1.28
NDEL1-201ENST00000334527 PRAMEF12O95522 483 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 HRH2P25021 359 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 HTR1EP28566 365 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 GPNMBQ14956 572 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 HID1Q8IV36 788 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 SLC43A3Q8NBI5 491 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 SEPT8Q92599 483 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 BIRC7Q96CA5 298 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 SEPHS2Q99611 448 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 GPR63Q9BZJ6 419 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 HEBP1Q9NRV9 189 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 TRPM5Q9NZQ8 1165 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 ATXN10Q9UBB4 475 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 CROCCQ5TZA2 2017 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 NPPAP01160 153 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 HMGA1P17096 107 aaKnown RBP23.07■■□□□ 1.28
NDEL1-201ENST00000334527 CTPS1P17812 591 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 MZF1P28698 734 aaPredicted RBP23.07■■□□□ 1.28
NDEL1-201ENST00000334527 RPS6KA3P51812 740 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 SLC8B1Q6J4K2 584 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 PROSER1Q86XN7 944 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 NPAS4Q8IUM7 802 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 FBXL20Q96IG2 436 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 C8orf4Q9NR00 106 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 TMEM45AQ9NWC5 275 aa23.07■■□□□ 1.28
NDEL1-201ENST00000334527 A0A087WXM4 84 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 OR7A17O14581 309 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 PRMT5O14744 637 aaPredicted RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 KATNA1O75449 491 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 CLIC3O95833 236 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 CNPP09543 421 aaKnown RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 C7P10643 843 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 G6PDP11413 515 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 OR4D2P58180 307 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 RHOAP61586 193 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 BIRC2Q13490 618 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 PCBP2Q15366 365 aaKnown RBP eCLIP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 NR6A1Q15406 480 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 ATXN7L2Q5T6C5 722 aaPredicted RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 LYSMD3Q7Z3D4 306 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 CARNMT1Q8N4J0 409 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 OR4F6Q8NGB9 312 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 EID2BQ96D98 161 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 CCDC97Q96F63 343 aaPredicted RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 TMEM175Q9BSA9 504 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 TNPO3Q9Y5L0 923 aaKnown RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 ST14Q9Y5Y6 855 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 C2orf78A6NCI8 922 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 H0Y626 953 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 SCAMP3O14828 347 aaKnown RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 LDLRP01130 860 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 S100BP04271 92 aaPredicted RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 GTF2H2Q13888 395 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 GTF2H2CQ6P1K8 395 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 SBSNQ6UWP8 590 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 ADAMTSL2Q86TH1 951 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 RALGPS2Q86X27 583 aaPredicted RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 ISG20Q96AZ6 181 aaKnown RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 PDLIM5Q96HC4 596 aaKnown RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 PPM1MQ96MI6 270 aa23.06■■□□□ 1.28
NDEL1-201ENST00000334527 TUBA8Q9NY65 449 aaPredicted RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 FCF1Q9Y324 198 aaKnown RBP23.06■■□□□ 1.28
NDEL1-201ENST00000334527 LSM1O15116 133 aaKnown RBP23.05■■□□□ 1.28
NDEL1-201ENST00000334527 CLOCKO15516 846 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 SEC24AO95486 1093 aa23.05■■□□□ 1.28
NDEL1-201ENST00000334527 ALPIP09923 528 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms