RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RFTN2Q52LD8 501 aaPredicted RBP10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 NKX1-2Q9UD57 310 aaPredicted RBP10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 OR10H1Q9Y4A9 318 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 WASF2Q9Y6W5 498 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 PARP4Q9UKK3 1724 aaKnown RBP10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 TVP23AA6NH52 213 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 FAM86B2P0C5J1 330 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 MAGEA11P43364 429 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 CSTF1Q05048 431 aaKnown RBP10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 ATF7IP2Q5U623 682 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 CBWD1Q9BRT8 395 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 MROH8Q9H579 483 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
SPTBN1-201ENST00000333896 CBX4O00257 560 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 PER2O15055 1255 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 RPS3P23396 243 aaKnown RBP eCLIP10.24□□□□□ -0.779e-11■□□□□ 10.8
SPTBN1-201ENST00000333896 CDH11P55287 796 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 COLEC12Q5KU26 742 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TMEM214Q6NUQ4 689 aaKnown RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TMEM199Q8N511 208 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CCDC120Q96HB5 630 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF607Q96SK3 696 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 COQ10BQ9H8M1 238 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TUBG2Q9NRH3 451 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 RNF146Q9NTX7 359 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 GNG13Q9P2W3 67 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TSPAN3O60637 253 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 RPS17P08708 135 aaKnown RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 NOS2P35228 1153 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ETV3P41162 512 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TCEA2Q15560 299 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 COL28A1Q2UY09 1125 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 IER5Q5VY09 327 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ACBD4Q8NC06 268 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 IFT27Q9BW83 186 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TNRQ92752 1358 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZBTB14O43829 449 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 F9P00740 461 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 DGKQP52824 942 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 MXD1Q05195 221 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ORC1Q13415 861 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 RABL3Q5HYI8 236 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 NDUFAF5Q5TEU4 345 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 SNX20Q7Z614 316 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZSCAN1Q8NBB4 408 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 XPNPEP3Q9NQH7 507 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ANKEF1Q9NU02 776 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 PLA2G4CQ9UP65 541 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ALOX15BO15296 676 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 UGT2B17O75795 530 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 OR56A5P0C7T3 313 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZDHHC11BP0C7U3 371 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 RAP2AP10114 183 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 MAPTP10636 758 aaKnown RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CD53P19397 219 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 RAB3BP20337 219 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 HOXD10P28358 340 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 GPSM2P81274 684 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ERFEQ4G0M1 354 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 DCDC5Q6ZRR9 648 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 NXPE2Q96DL1 559 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CKAP5Q14008 2032 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TLX1P31314 330 aaPredicted RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 PRKAR1BP31321 381 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 PPP5CP53041 499 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 LIMK2P53671 638 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 SGCGQ13326 291 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ANKRD52Q8NB46 1076 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 OR4A15Q8NGL6 344 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 HCN3Q9P1Z3 774 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 XKRYO14609 159 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CABYRO75952 493 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 S100A8P05109 93 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CKBP12277 381 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 FMO4P31512 558 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 PPP3R1P63098 170 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZCCHC12Q6PEW1 402 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 NAPRTQ6XQN6 538 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 DCP1BQ8IZD4 617 aaKnown RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF563Q8TA94 476 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 STAG3L4Q8TBR4 150 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 FBXO32Q969P5 355 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 LMAN2LQ9H0V9 348 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 SEMA4BQ9NPR2 832 aaPredicted RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 U3KQV3 271 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 AKAP6Q13023 2319 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ZNF705EA8MWA4 302 aaPredicted RBP10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 CYP11A1P05108 521 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 AKT2P31751 481 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 KLRC3Q07444 240 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 MOXD1Q6UVY6 613 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 NOXA1Q86UR1 476 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 UBR7Q8N806 425 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 C11orf65Q8NCR3 313 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 GALNT11Q8NCW6 608 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TMEM68Q96MH6 324 aa10.24□□□□□ -0.77
SPTBN1-201ENST00000333896 TMEM47Q9BQJ4 181 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms