RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SPAM1P38567 509 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 RGS4P49798 205 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 ERVPABLB-1P60509 514 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 SNRPD1P62314 119 aaKnown RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 MED21Q13503 144 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 PCBP2Q15366 365 aaKnown RBP eCLIP17.16■□□□□ 0.34
DDX28-201ENST00000332395 C18orf21Q32NC0 220 aaPredicted RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 C6orf10Q5SRN2 563 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 LYPLAL1Q5VWZ2 237 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 BLOC1S3Q6QNY0 202 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 SCIMPQ6UWF3 145 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 OR2T11Q8NH01 316 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 SLC22A17Q8WUG5 538 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 NCSTNQ92542 709 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 VOPP1Q96AW1 172 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 DCUN1D1Q96GG9 259 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 LRCH3Q96II8 777 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 BTBD9Q96Q07 612 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 AIG1Q9NVV5 245 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 TNPO3Q9Y5L0 923 aaKnown RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 CCL16O15467 120 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 FFAR2O15552 330 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 TRIM16O95361 564 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 RHDQ02161 417 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 IL23RQ5VWK5 629 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 GRAMD4Q6IC98 578 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 LETMD1Q6P1Q0 360 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 ARHGAP22Q7Z5H3 698 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 MYO1HQ8N1T3 1032 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 CBARPQ8N350 705 aaPredicted RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 KLHL23Q8NBE8 558 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 RIN3Q8TB24 985 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 ATP6V1E2Q96A05 226 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 PAWRQ96IZ0 340 aaKnown RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 SLC45A3Q96JT2 553 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 LYSMD1Q96S90 227 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 HOPXQ9BPY8 73 aaPredicted RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 NOL11Q9H8H0 719 aaKnown RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 IL1RL2Q9HB29 575 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 CCL26Q9Y258 94 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 A0A1B0GVG6 124 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 RAD51BO15315 384 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 BNIP3LO60238 219 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 DNAJA2O60884 412 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 RNASEH2AO75792 299 aaKnown RBP17.15■□□□□ 0.34
DDX28-201ENST00000332395 BAIAP3O94812 1187 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 S100BP04271 92 aaPredicted RBP17.15■□□□□ 0.34
DDX28-201ENST00000332395 CCR2P41597 374 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 MRPL19P49406 292 aaKnown RBP17.15■□□□□ 0.34
DDX28-201ENST00000332395 SEMG2Q02383 582 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 CNPY1Q3B7I2 92 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 MAP7D1Q3KQU3 841 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 GPR33Q49SQ1 333 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 PDPRQ8NCN5 879 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 CATSPER1Q8NEC5 780 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 ADCY4Q8NFM4 1077 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 EZH1Q92800 747 aaPredicted RBP17.15■□□□□ 0.34
DDX28-201ENST00000332395 CCT7Q99832 543 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 SLC52A3Q9NQ40 469 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 RIC8BQ9NVN3 520 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 ABCD2Q9UBJ2 740 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 HS3ST2Q9Y278 367 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 SLC4A7Q9Y6M7 1214 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 FXYD1O00168 92 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 ZCCHC18P0CG32 403 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 PFKLP17858 780 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 DGKAP23743 735 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 ARL1P40616 181 aaPredicted RBP17.15■□□□□ 0.34
DDX28-201ENST00000332395 GRIK2Q13002 908 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 MYLK3Q32MK0 819 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 FUT11Q495W5 492 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 COQ5Q5HYK3 327 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 PRMT9Q6P2P2 845 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 C22orf39Q6P5X5 142 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 CRTC1Q6UUV9 634 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 GOLGA7Q7Z5G4 137 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 TICAM1Q8IUC6 712 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 NXPE1Q8N323 547 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 MINDY1Q8N5J2 469 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 ZBTB2Q8N680 514 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 DTNBP1Q96EV8 351 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 TUBGCP5Q96RT8 1024 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 HTATIP2Q9BUP3 242 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 BRINP2Q9C0B6 783 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 C11orf49Q9H6J7 331 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 AP4S1Q9Y587 144 aa17.15■□□□□ 0.34
DDX28-201ENST00000332395 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
DDX28-201ENST00000332395 NME4O00746 187 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 CSPG5O95196 566 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 ERVK-8P63133 956 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 FOLH1Q04609 750 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 GTF2H2Q13888 395 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 RCAN2Q14206 197 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 LRRC66Q68CR7 880 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 GTF2H2CQ6P1K8 395 aa17.14■□□□□ 0.33
DDX28-201ENST00000332395 CYP2R1Q6VVX0 501 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms