RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 WDR26Q9H7D7 661 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 NDUFB5O43674 189 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 MANFP55145 182 aaKnown RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 HEPACAMQ14CZ8 416 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 GCNT7Q6ZNI0 430 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TMPRSS11BQ86T26 416 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TSTD1Q8NFU3 115 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 FNDC11Q9BVV2 318 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 RHBGQ9H310 441 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 LIN7AO14910 233 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 GDF10P55107 478 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 UBXN11Q5T124 520 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 C22orf39Q6P5X5 142 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 ZC3H7AQ8IWR0 971 aaKnown RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 ADCY4Q8NFM4 1077 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 RANBP9Q96S59 729 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 MT-CYBP00156 380 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-201ENST00000328300 IMPDH1P20839 514 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 GRIA3P42263 894 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 NAE1Q13564 534 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 GPR156Q8NFN8 814 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TBCDQ9BTW9 1192 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 KIFC1Q9BW19 673 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 NMUR1Q9HB89 426 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 C1orf109Q9NX04 203 aa11.29□□□□□ -0.6
COL4A5-201ENST00000328300 TRIM24O15164 1050 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ZDHHC24Q6UX98 284 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 FAM124AQ86V42 546 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 COL18A1P39060 1754 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 K7EPI3 171 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 M0QZQ0 153 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 MPSTP25325 297 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 PSMD4P55036 377 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 SLC25A3Q00325 362 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 TJP1Q07157 1748 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 CCDC157Q569K6 752 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 GCNT6Q5T4J0 391 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 C11orf88Q6PI97 169 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ABRAXAS1Q6UWZ7 409 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 FBXO30Q8TB52 745 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 RACGAP1Q9H0H5 632 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 HSFX1Q9UBD0 423 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 RPP38P78345 283 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 MRPS22P82650 360 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 RIPK1Q13546 671 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 RINLQ6ZS11 566 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ADAMTS15Q8TE58 950 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 OLFM1Q99784 485 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 SCN7AQ01118 1682 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 METTL18O95568 372 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 GPIP06744 558 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 HERVK_113P63132 956 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 DGUOKQ16854 277 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 OTUD3Q5T2D3 398 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 HIPK1Q86Z02 1210 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 FAM20CQ8IXL6 584 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 OFCC1Q8IZS5 231 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 PIF1Q9H611 641 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 TMED5Q9Y3A6 229 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 RHPN2P1A8MT19 583 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 LEFTY2O00292 366 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 UGT2B11O75310 529 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 TMEM63AO94886 807 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 ITPKAP23677 461 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 AVPR1BP47901 424 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 EPHX4Q8IUS5 362 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 CFAP206Q8IYR0 622 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
COL4A5-201ENST00000328300 GSTK1Q9Y2Q3 226 aa11.28□□□□□ -0.6
COL4A5-201ENST00000328300 IFNGP01579 166 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 PAX7P23759 505 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 CHIT1Q13231 466 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 LARS2Q15031 903 aaKnown RBP11.27□□□□□ -0.6
COL4A5-201ENST00000328300 AAK1Q2M2I8 961 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 SLC47A1Q96FL8 570 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 CDKN2AIPNLQ96HQ2 116 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 HPS4Q9NQG7 708 aa11.27□□□□□ -0.6
COL4A5-201ENST00000328300 AGR2O95994 175 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ANXA4P09525 319 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms