RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 N4BP2L1Q5TBK1 243 aaPredicted RBP10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM220Q6QAJ8 160 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 OTOAQ7RTW8 1153 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM105Q8N8V8 129 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 MDM1Q8TC05 714 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 GPR78Q96P69 363 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 EMCNQ9ULC0 261 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 GPR34Q9UPC5 381 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 INVSQ9Y283 1065 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM98Q9Y2Y6 226 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 CACNA1IQ9P0X4 2223 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 ZDBF2Q9HCK1 2354 aa10.09□□□□□ -0.79
VIPAS39-201ENST00000327028 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 POM121BA6NF01 834 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CHUKO15111 745 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 KPNA5O15131 536 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 TSPAN12O95859 305 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 PROCP04070 461 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 AOAHP28039 575 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CCR7P32248 378 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 RPL6Q02878 288 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CSHL1Q14406 222 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 GBX1Q14549 363 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 NFATC4Q14934 902 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CCDC153Q494R4 210 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 PLEKHS1Q5SXH7 462 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 AGAP9Q5VTM2 703 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 TSSK4Q6SA08 328 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ABI3BPQ7Z7G0 1075 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 TRAPPC5Q8IUR0 188 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 SPNS2Q8IVW8 549 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CPNE9Q8IYJ1 553 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 DTWD2Q8NBA8 298 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 NXNL1Q96CM4 212 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 BMFQ96LC9 184 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 LINC00615Q96LM1 132 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 FAM111AQ96PZ2 611 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ORAI3Q9BRQ5 295 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CCM2Q9BSQ5 444 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 DERL2Q9GZP9 239 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 NMRAL1Q9HBL8 299 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ZNF358Q9NW07 568 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 TMEM216Q9P0N5 145 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 RUVBL2Q9Y230 463 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 SLC17A4Q9Y2C5 497 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CA5BQ9Y2D0 317 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 A6NNZ2 444 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 EIF3FO00303 357 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 NUAK1O60285 661 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 PLIN3O60664 434 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 APOA4P06727 396 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 DHRS4L1P0CG22 281 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CBSLP0DN79 551 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CD1DP15813 335 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 BCKDHBP21953 392 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 KELP23276 732 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 DGKAP23743 735 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CD27P26842 260 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CBSP35520 551 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ETV4P43268 484 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 FNTBP49356 437 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 RGS4P49798 205 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 IL2P60568 153 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ATP6V0D1P61421 351 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 YPEL5P62699 121 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 SEPT7Q16181 437 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ZNF658BQ4V348 819 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 LRRC8EQ6NSJ5 796 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 KLC3Q6P597 504 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 BMP8AQ7Z5Y6 402 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 ZNF547Q8IVP9 402 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 C1orf210Q8IVY1 113 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 MAML2Q8IZL2 1156 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 SPATA6LQ8N4H0 392 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 BEND7Q8N7W2 519 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 FAM174AQ8TBP5 190 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 MGARPQ8TDB4 240 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 SNX19Q92543 992 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 LINGO1Q96FE5 620 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 PDLIM5Q96HC4 596 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 C12orf65Q9H3J6 166 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 RMI1Q9H9A7 625 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CEP192Q8TEP8 1941 aa10.08□□□□□ -0.8
VIPAS39-201ENST00000327028 CCDC189A1A4V9 331 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 H0Y8X5 98 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 ENO3P13929 434 aaPredicted RBP10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 RABIFP47224 123 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 WDR4P57081 412 aaKnown RBP10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 ACAP2Q15057 778 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 HHATQ5VTY9 493 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 C16orf46Q6P387 395 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 LVRNQ6Q4G3 990 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 CRTC3Q6UUV7 619 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 LRRTM4Q86VH4 590 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 LONP2Q86WA8 852 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 OXR1Q8N573 874 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 EEF1AKMT1Q8WVE0 214 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 ELMO1Q92556 727 aa10.07□□□□□ -0.8
VIPAS39-201ENST00000327028 INTS9Q9NV88 658 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms