RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SLC35B2Q8TB61 432 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 EXD2Q9NVH0 621 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ING4Q9UNL4 249 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 BTN3A3O00478 584 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 CXCR6O00574 342 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 CHST10O43529 356 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ITM2AO43736 263 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 CFHP08603 1231 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 TCF4P15884 667 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ITGAXP20702 1163 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ZNF280AP59817 542 aaPredicted RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 SIM2Q14190 667 aaPredicted RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 PHYKPLQ8IUZ5 450 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.688e-14■■□□□ 11.5
SNRNP200-201ENST00000323853 HPS1Q92902 700 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 EBF4Q9BQW3 602 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 HIPK3Q9H422 1215 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 IMP3Q9NV31 184 aaKnown RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 PLK2Q9NYY3 685 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 TBC1D14Q9P2M4 693 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 MSRAQ9UJ68 235 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ABHD14A-ACY1A0A1B0GW23 586 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 C9JVG2 144 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 TRMUO75648 421 aaKnown RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 STBD1O95210 358 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 PTGER3P43115 390 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 CHRNA4P43681 627 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 HERC3Q15034 1050 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 FUT10Q6P4F1 479 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 FCRL4Q96PJ5 515 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 HAPLN3Q96S86 360 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 LMAN2LQ9H0V9 348 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 TFB2MQ9H5Q4 396 aaKnown RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 OXSMQ9NWU1 459 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 TRPS1Q9UHF7 1281 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 TLR6Q9Y2C9 796 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ATRNL1Q5VV63 1379 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 DUSP11O75319 330 aaKnown RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ECDO95905 644 aaPredicted RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 DNTTP04053 509 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 NR2F6P10588 404 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 RCVRNP35243 200 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 AP1S1P61966 158 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 PLEKHG4Q58EX7 1191 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ZNF730Q6ZMV8 503 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 LRRC17Q8N6Y2 441 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 KLHL23Q8NBE8 558 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ACAT2Q9BWD1 397 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 ZNF214Q9UL59 606 aaPredicted RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 POMPQ9Y244 141 aa10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 MRPS7Q9Y2R9 242 aaKnown RBP10.8□□□□□ -0.68
SNRNP200-201ENST00000323853 CASKO14936 926 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 SEPT4O43236 478 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 MPZL2O60487 215 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 SERPINA1P01009 418 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 UGT1A5P35504 534 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 MYBPC1Q00872 1141 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 TOMM20Q15388 145 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 SEC14L3Q9UDX4 400 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 PCDHGC4Q9Y5F7 938 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 YJEFN3A6XGL0 299 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 HERVK_113P63132 956 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC25A11Q02978 314 aaKnown RBP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 HNRNPDQ14103 355 aaKnown RBP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 CLEC20AQ6ZU45 233 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 NPAS4Q8IUM7 802 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 TMEM192Q8IY95 271 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 C12orf42Q96LP6 360 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 FCRL5Q96RD9 977 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 ERVK-6Q9BXR3 956 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 COQ10BQ9H8M1 238 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 FAM159BA6NKW6 160 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 TLL1O43897 1013 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 OMPP47874 163 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 PNLIPRP1P54315 467 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 NTAN1Q96AB6 310 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 ESR1P03372 595 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 ELNP15502 786 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 NAE1Q13564 534 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 CCNIQ14094 377 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 RFTN2Q52LD8 501 aaPredicted RBP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC43A3Q8NBI5 491 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 FEM1CQ96JP0 617 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 PCDHGB3Q9Y5G1 929 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 FADS2P1A8MWK0 482 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 CCNB2O95067 398 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 ZBTB48P10074 688 aaPredicted RBP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 GALK1P51570 392 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 DLG1Q12959 904 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 C9orf64Q5T6V5 341 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 KCTD8Q6ZWB6 473 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 PEG10Q86TG7 708 aaKnown RBP10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 EQTNQ9NQ60 294 aa10.79□□□□□ -0.68
SNRNP200-201ENST00000323853 COL1A1P02452 1464 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms