RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 EEFSECP57772 596 aaKnown RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 LBX2Q6XYB7 198 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 OR10A6Q8NH74 314 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 MCFD2Q8NI22 146 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 EFHD2Q96C19 240 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-202ENST00000318266 DSN1Q9H410 356 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RIBC2Q9H4K1 309 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 RASSF1Q9NS23 344 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 IFT52Q9Y366 437 aa9.55□□□□□ -0.88
PTPRA-202ENST00000318266 PRMT5O14744 637 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 PSMD3O43242 534 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MAFKO60675 156 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 EEDO75530 441 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 USP2O75604 605 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 GJB3O75712 270 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 PRKD3O94806 890 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 KCNK2O95069 426 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 GABARAPO95166 117 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 S1PR4O95977 384 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 HTR1EP28566 365 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MZF1P28698 734 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ZFP36L2P47974 494 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 TAF6P49848 677 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 HNRNPFP52597 415 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ISL1P61371 349 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 CBX2Q14781 532 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 NPTX1Q15818 432 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 STEAP3Q658P3 488 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 RANBP10Q6VN20 620 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 USP43Q70EL4 1123 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 BNIPLQ7Z465 357 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 PROSER1Q86XN7 944 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 GATAD2AQ86YP4 633 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 FBXO39Q8N4B4 442 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 CALML6Q8TD86 181 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 NTAN1Q96AB6 310 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 AURKBQ96GD4 344 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF486Q96H40 463 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 CGREF1Q99674 301 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 NFKBIZQ9BYH8 718 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 HOXD1Q9GZZ0 328 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 RNF38Q9H0F5 515 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 NEK6Q9HC98 313 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 AIG1Q9NVV5 245 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 IL37Q9NZH6 218 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ADGRE2Q9UHX3 823 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 INTS6Q9UL03 887 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 RNF112Q9ULX5 631 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 LCTP09848 1927 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 FAM92AA1XBS5 289 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MYBPHLA2RUH7 354 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 CCDC162PA2VCL2 907 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ASB14A6NK59 587 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 TTC34A8MYJ7 566 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SLC22A1O15245 554 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 RAD51BO15315 384 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DFNA5O60443 496 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 TSPAN3O60637 253 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 RFPL2O75678 378 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 PRSS23O95084 383 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 PFKLP17858 780 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ALOX12P18054 663 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ITIH1P19827 911 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ADRA1AP35348 466 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SERPINH1P50454 418 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 FOXM1Q08050 763 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 TSNQ15631 228 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF549Q6P9A3 640 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SYVN1Q86TM6 617 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 HID1Q8IV36 788 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ARHGAP12Q8IWW6 846 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MICU2Q8IYU8 434 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 PROKR1Q8TCW9 393 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 BLOC1S5Q8TDH9 187 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DPF3Q92784 378 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 FAM162AQ96A26 154 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ZHX1-C8orf76Q96EF9 292 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 VMP1Q96GC9 406 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DHRS1Q96LJ7 313 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SLC9A7Q96T83 725 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SMOQ99835 787 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 OSBPL10Q9BXB5 764 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ZBTB20Q9HC78 741 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DDX28Q9NUL7 540 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 GALPQ9UBC7 116 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MAGEL2Q9UJ55 1249 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 IKZF3Q9UKT9 509 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 BOLA1Q9Y3E2 137 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 TNPO2O14787 897 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 BCKDKO14874 412 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MT-ND2P03891 347 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 LCKP06239 509 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ENO2P09104 434 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DBTP11182 482 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DNAJB2P25686 324 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms