RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ATG9BQ674R7 924 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NECAB2Q7Z6G3 386 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 LINC01465Q8N7H1 131 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 OR7G1Q8NGA0 311 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 GJD4Q96KN9 370 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ATOH8Q96SQ7 321 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 KATNAL1Q9BW62 490 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SOX17Q9H6I2 414 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 DNMT3BQ9UBC3 853 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NUDT5Q9UKK9 219 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NOX1Q9Y5S8 564 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZBTB42B2RXF5 422 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 H3BMM5 538 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MT-ND2P03891 347 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 KCNE1P15382 129 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ERP29P30040 261 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CCR1P32246 355 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 KRT20P35900 424 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 KPNA1P52294 538 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 IFITM3Q01628 133 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF460Q14592 562 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZFP69Q49AA0 526 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF362Q5T0B9 420 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 GDPGP1Q6ZNW5 385 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 OTOP3Q7RTS5 596 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NPWQ8N729 165 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 FNDC5Q8NAU1 212 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PABPC5Q96DU9 382 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 YIPF6Q96EC8 236 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MOCOSQ96EN8 888 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF583Q96ND8 569 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF382Q96SR6 550 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MED10Q9BTT4 135 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SYNDIG1Q9H7V2 258 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MYOZ2Q9NPC6 264 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 KCNH4Q9UQ05 1017 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PCDHGA10Q9Y5H3 936 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 A0A075B6Q4 140 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PABPN1LA6NDY0 278 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RRN3P2A6NIE6 340 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 TBX1O43435 398 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MFN2O95140 757 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ACVR2AP27037 513 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SLC15A1P46059 708 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NRIP1P48552 1158 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ACVR1Q04771 509 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 GRB7Q14451 532 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PROX2Q3B8N5 592 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 INO80DQ53TQ3 878 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MARC1Q5VT66 337 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ERICH5Q6P6B1 374 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ARHGAP36Q6ZRI8 547 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RAB43Q86YS6 212 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MFSD6LQ8IWD5 586 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RYBPQ8N488 228 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 FAM120BQ96EK7 910 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SLIRPQ9GZT3 109 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 GABARAPL1Q9H0R8 117 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SCUBE2Q9NQ36 999 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 OLA1Q9NTK5 396 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SMIM28A0A1B0GU29 152 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SOWAHBA6NEL2 793 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 EFCAB9A8MZ26 197 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CD36P16671 472 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PCMT1P22061 227 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 IGFBP5P24593 272 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ABHD18Q0P651 414 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MAPKAPK3Q16644 382 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 FUT11Q495W5 492 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 UBE2UQ5VVX9 321 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 METTL2BQ6P1Q9 378 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 FLCNQ8NFG4 579 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 FIG4Q92562 907 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 AMBRA1Q9C0C7 1298 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PLCXD1Q9NUJ7 323 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 STMN3Q9NZ72 180 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 VPS51Q9UID3 782 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CAB39Q9Y376 341 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 COL5A3P25940 1745 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NRAPQ86VF7 1730 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CXCR6O00574 342 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 B4GAT1O43505 415 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RPLP0P05388 317 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NCF1P14598 390 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 DDOSTP39656 456 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CASP3P42574 277 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NRG1Q02297 640 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SLC13A2Q13183 592 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 OLIG2Q13516 323 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ARMCX4Q5H9R4 360 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PAGE3Q5JUK9 113 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF691Q5VV52 312 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PPP2R2DQ66LE6 453 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF549Q6P9A3 640 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 METTL6Q8TCB7 284 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PROKR1Q8TCW9 393 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ANKRD49Q8WVL7 239 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 HTRA1Q92743 480 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 EXT2Q93063 718 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms