RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PRR5-ARHGAP8B1AHC4 643 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ADRB2P07550 413 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 EPCAMP16422 314 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GSSP48637 474 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ARHGAP8P85298 464 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 IRF8Q02556 426 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 KCNC4Q03721 635 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CCL15Q16663 113 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 MTSS1LQ765P7 747 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DDX17Q92841 729 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 FBXO6Q9NRD1 293 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ARPC4-TTLL3A0A0A6YYG9 625 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DLDP09622 509 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PORP16435 677 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 AMPD1P23109 780 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 HSF2Q03933 536 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 MERTKQ12866 999 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 KLF1Q13351 362 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GALNT3Q14435 633 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 EIF4HQ15056 248 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SERPINA13PQ6UXR4 307 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DENND6AQ8IWF6 608 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 RAET1EQ8TD07 263 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 FATE1Q969F0 183 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SEPT5Q99719 369 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 TLR6Q9Y2C9 796 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 NR2E3Q9Y5X4 410 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 C1QTNF3-AMACRE9PGA6 284 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SLC16A5O15375 505 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PEX11AO75192 247 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CYP11A1P05108 521 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 TACSTD2P09758 323 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CENPAP49450 140 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PRMT2P55345 433 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 FBXW4P57775 412 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 TAF1CQ15572 869 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SMIM5Q71RC9 77 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ZBTB9Q96C00 473 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 LRIG1Q96JA1 1093 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DERL2Q9GZP9 239 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 TEX28O15482 410 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 NOS1APO75052 506 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 RASAL1O95294 804 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 POMCP01189 267 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GTF2E2P29084 291 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GLRBP48167 497 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ARHGDIBP52566 201 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 MGAT5BQ3V5L5 792 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 TYW3Q6IPR3 259 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ADNP2Q6IQ32 1131 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 HEATR4Q86WZ0 1026 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SMYD1Q8NB12 490 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CLHC1Q8NHS4 586 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 FAM240BA0A1B0GVZ2 78 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 AP3D1O14617 1153 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 TYROBPO43914 113 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 GATBO75879 557 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 C9P02748 559 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 IL4RP24394 825 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CACNB3P54284 484 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 EARS2Q5JPH6 523 aaKnown RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF621Q6ZSS3 439 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 ARMC8Q8IUR7 673 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 CRYBG2Q8N1P7 616 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SLC22A18Q96BI1 424 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 SEPHS2Q99611 448 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 MND1Q9BWT6 205 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 PITHD1Q9GZP4 211 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 DNAJC11Q9NVH1 559 aa8.73□□□□□ -1.01
COL6A5-202ENST00000312481 KIAA1522Q9P206 1035 aaPredicted RBP8.73□□□□□ -1.01
COL6A5-202ENST00000312481 UGDHO60701 494 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 KCNJ13O60928 360 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ATG9BQ674R7 924 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CHST9Q7L1S5 443 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 C16orf62Q7Z3J2 963 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 GPRC5CQ9NQ84 441 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF99A8MXY4 864 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 NADKO95544 446 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 LGALS2P05162 132 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 DAG1Q14118 895 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 STARD3Q14849 445 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 FNDC8Q8TC99 324 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ALG9Q9H6U8 611 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CAB39LQ9H9S4 337 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 A3GALT2U3KPV4 340 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 IGLV3-22A0A075B6J6 115 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 E2F3O00716 465 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 APOL3O95236 402 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ADH1CP00326 375 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 RING1Q06587 406 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 FGL1Q08830 312 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 POU4F2Q12837 409 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TUSC3Q13454 348 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 GCNT6Q5T4J0 391 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ANKFN1Q8N957 763 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PIH1D2Q8WWB5 315 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ELMO3Q96BJ8 720 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF382Q96SR6 550 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 MIPEPQ99797 713 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms