RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 DR1Q01658 176 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ACVR1Q04771 509 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PCID2Q5JVF3 399 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 LDLRAP1Q5SW96 308 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 CASC4Q6P4E1 433 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 CFAP206Q8IYR0 622 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 SPATA4Q8NEY3 305 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PMEPA1Q969W9 287 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 SIGLEC10Q96LC7 697 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PPP1R2P1Q96PQ5 205 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 NAP1L3Q99457 506 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 LRRN3Q9H3W5 708 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ZDHHC3Q9NYG2 299 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 GALPQ9UBC7 116 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PCYOX1Q9UHG3 505 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PIKFYVEQ9Y2I7 2098 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 IGLV3-16A0A075B6K0 115 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 GOLGA6L10A0A0M3HER8 536 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 RHPN2P1A8MT19 583 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 RAD51CO43502 376 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ATP1B2P14415 290 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ITIH1P19827 911 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 MAGEA6P43360 314 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ABCG1P45844 678 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 HHEXQ03014 270 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PTK6Q13882 451 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 FASTKD3Q14CZ7 662 aaKnown RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 SKIDA1Q1XH10 827 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ISXQ2M1V0 245 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 ZNF658BQ4V348 819 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 UNQ6494/PRO21346Q6UXR6 183 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 AMZ2Q86W34 360 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 VRK3Q8IV63 474 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 DCBLD1Q8N8Z6 715 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PHC3Q8NDX5 983 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PPHLN1Q8NEY8 458 aaKnown RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 OR4L1Q8NH43 312 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 RANBP9Q96S59 729 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 INSM2Q96T92 566 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 WWP1Q9H0M0 922 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 DPH5Q9H2P9 285 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 KLHL3Q9UH77 587 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 NEUROG3Q9Y4Z2 214 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 A8MU76 341 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 DNALI1O14645 258 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 TRIM16O95361 564 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 ARCN1P48444 511 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 RPIAP49247 311 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 PRAMEP78395 509 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 SLC7A5Q01650 507 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 CACNG1Q06432 222 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 DHX9Q08211 1270 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 LRP8Q14114 963 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 C3orf38Q5JPI3 329 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 SNAP47Q5SQN1 464 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 TMPRSS12Q86WS5 348 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 DENND6AQ8IWF6 608 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 DTX3LQ8TDB6 740 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 PPM1MQ96MI6 270 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 KIFC1Q9BW19 673 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 RMI1Q9H9A7 625 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 IMP3Q9NV31 184 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 BFARQ9NZS9 450 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 OGFRQ9NZT2 677 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 CPNE7Q9UBL6 633 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 FEZ2Q9UHY8 353 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 RUVBL2Q9Y230 463 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 MAD1L1Q9Y6D9 718 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 IGHV1OR21-1A0A087WYE8 117 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 ZCWPW2A0A1B0GU75 182 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 FAM221BA6H8Z2 402 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 NUDT21O43809 227 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 URI1O94763 535 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 GP1BAP07359 652 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 MAGEA3P43357 314 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 DUSP3P51452 185 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 ITGA8P53708 1063 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 GFERP55789 205 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 UBE2IP63279 158 aaKnown RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 CTBP1Q13363 440 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 ZDHHC20Q5W0Z9 365 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 ZNF669Q96BR6 464 aaPredicted RBP11.81□□□□□ -0.52
SCFD1-201ENST00000311943 RMDN2Q96LZ7 410 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 IL22Q9GZX6 179 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 SOX13Q9UN79 622 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 SATB2Q9UPW6 733 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 CRYL1Q9Y2S2 319 aa11.81□□□□□ -0.52
SCFD1-201ENST00000311943 USP24Q9UPU5 2620 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 DSPP15924 2871 aaKnown RBP11.8□□□□□ -0.52
SCFD1-201ENST00000311943 ESYT3A0FGR9 886 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 D6RAR5 112 aa11.8□□□□□ -0.52
SCFD1-201ENST00000311943 CD3EAPO15446 510 aaKnown RBP11.8□□□□□ -0.52
SCFD1-201ENST00000311943 KIF1CO43896 1103 aaKnown RBP11.8□□□□□ -0.52
SCFD1-201ENST00000311943 GAS8O95995 478 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms