RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MAGOHBQ96A72 148 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 OXNAD1Q96HP4 312 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 PPP1R2P1Q96PQ5 205 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 MCCC1Q96RQ3 725 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 TRIB3Q96RU7 358 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 RBM15Q96T37 977 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD6-201ENST00000309279 GORASP1Q9BQQ3 440 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 GPR174Q9BXC1 333 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SERHL2Q9H4I8 314 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PREBQ9HCU5 417 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SLC13A4Q9UKG4 626 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PCOLCE2Q9UKZ9 415 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 RPL26L1Q9UNX3 145 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 TRIM33Q9UPN9 1127 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 FADS3Q9Y5Q0 445 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 R4GN57 208 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PI4KAP42356 2102 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 LRRK1Q38SD2 2015 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 METTL12A8MUP2 240 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 UPK3BL1B0FP48 263 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 UPK3BL2E5RIL1 263 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PROB1E7EW31 1015 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 YKT6O15498 198 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 MAP3K13O43283 966 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 LATO43561 262 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PHF2O75151 1096 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 NDUFS2O75306 463 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ANXA9O76027 345 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 CSTBP04080 98 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 COILP38432 576 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 PAFAH1B1P43034 410 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 FNTAP49354 379 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 DIO1P49895 249 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ARL4CP56559 192 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 HTD2P86397 168 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 KCTD11Q693B1 232 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 IYDQ6PHW0 289 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 CCDC137Q6PK04 289 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 C4orf22Q6V702 233 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ZYG11AQ6WRX3 759 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 TRIM69Q86WT6 500 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PTRH1Q86Y79 214 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 SLITRK4Q8IW52 837 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 TMCO5AQ8N6Q1 288 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SMYD1Q8NB12 490 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 GLIS1Q8NBF1 620 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 OR6P1Q8NGX9 317 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 DNASE2BQ8WZ79 361 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SLC39A7Q92504 469 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ATOH1Q92858 354 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SLCO2A1Q92959 643 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 NKD1Q969G9 470 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 SDCCAG3Q96C92 435 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 INTS12Q96CB8 462 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 SCRN2Q96FV2 425 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 CAPZA3Q96KX2 299 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 HGH1Q9BTY7 390 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ADGRE3Q9BY15 652 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 UNKQ9C0B0 810 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 C6orf106Q9H6K1 298 aaPredicted RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 IFT22Q9H7X7 185 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 PCDH9Q9HC56 1237 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 ADPRHL2Q9NX46 363 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 MTRF1LQ9UGC7 380 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 PCYOX1Q9UHG3 505 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 FKBPLQ9UIM3 349 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 CHKBQ9Y259 395 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 AAR2Q9Y312 384 aaKnown RBP8.18□□□□□ -1.1
CHD6-201ENST00000309279 NEU2Q9Y3R4 380 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 OTOGLQ3ZCN5 2332 aa8.18□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3DA0A087WVF3 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3IA0A087WXS9 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3EA0A087X179 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3KA0A087X1G2 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 A0A0J9YYE9 177 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 C2orf72A6NCS6 295 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3FA6NER0 549 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 CAPN14A8MX76 684 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 ANKRD66B4E2M5 251 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3LB9A6J9 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 STMND1H3BQB6 276 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 CCDC188H7C350 402 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 AP3D1O14617 1153 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 RHOBTB1O94844 696 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 FSBPO95073 299 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 METTL18O95568 372 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 PLGP00747 810 aaPredicted RBP8.17□□□□□ -1.1
CHD6-201ENST00000309279 IFNB1P01574 187 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TRBC1P01850 177 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 IGHV4-34P06331 123 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 TBC1D3HP0C7X1 549 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 HPGDP15428 266 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 NFKBIAP25963 317 aa8.17□□□□□ -1.1
CHD6-201ENST00000309279 PSMB4P28070 264 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms