RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ATXN7O15265 892 aaPredicted RBP16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 UBXN7O94888 489 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 PDE1BQ01064 536 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 CLCA4Q14CN2 919 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 ANKS6Q68DC2 871 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 DENND5AQ6IQ26 1287 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 INO80CQ6PI98 192 aaPredicted RBP16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 ABRAXAS1Q6UWZ7 409 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 FAM83HQ6ZRV2 1179 aaPredicted RBP16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 PLXDC1Q8IUK5 500 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 SLC35B2Q8TB61 432 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 DCUN1D1Q96GG9 259 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 TGM7Q96PF1 710 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 EPB41L1Q9H4G0 881 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 LRRC40Q9H9A6 602 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 POT1Q9NUX5 634 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 SMOXQ9NWM0 555 aa16.72■□□□□ 0.27
HMGCLL1-202ENST00000308161 CCDC78A2IDD5 438 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 PRR19A6NJB7 356 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 STMND1H3BQB6 276 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 IFNB1P01574 187 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 ITGALP20701 1170 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 ZNF140P52738 457 aaPredicted RBP16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 RHDQ02161 417 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 GPR18Q14330 331 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 POU6F1Q14863 301 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 P3H1Q32P28 736 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 DCAF12Q5T6F0 453 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 AGAP9Q5VTM2 703 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 MICALCLQ6ZW33 695 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 RNF31Q96EP0 1072 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 DNAJC1Q96KC8 554 aaKnown RBP16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 LZTFL1Q9NQ48 299 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 IMP3Q9NV31 184 aaKnown RBP16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 OGFRQ9NZT2 677 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 PDP2Q9P2J9 529 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 CFAP20Q9Y6A4 193 aaKnown RBP16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 ATMQ13315 3056 aa16.71■□□□□ 0.27
HMGCLL1-202ENST00000308161 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 EFSO43281 561 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 RASSF9O75901 435 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 RALBP11234 206 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 CD82P27701 267 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 MC4RP32245 332 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 HADHAP40939 763 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 LMAN1P49257 510 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 SEPHS1P49903 392 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ARSDP51689 593 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 XIAPP98170 497 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 MSLNQ13421 630 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 SNX1Q13596 522 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 PLCL1Q15111 1095 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZRANB3Q5FWF4 1079 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 WASH2PQ6VEQ5 465 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ARHGAP22Q7Z5H3 698 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 GPR150Q8NGU9 434 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 C1orf54Q8WWF1 131 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 RSC1A1Q92681 617 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 DDA1Q9BW61 102 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ASPSCR1Q9BZE9 553 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 UCK1Q9HA47 277 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 WASH6PQ9NQA3 447 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 FEZ2Q9UHY8 353 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 PCDHGA3Q9Y5H0 932 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 B4E171 279 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ERVH48-1M5A8F1 160 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 CAPN5O15484 640 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 LDB2O43679 373 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 KCNJ13O60928 360 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 POLBP06746 335 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 TSPAN7P41732 249 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 LEPRP48357 1165 aaKnown RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ATP1A2P50993 1020 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 RAB15P59190 212 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 DMPKQ09013 629 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 RPE65Q16518 533 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 KCTD11Q693B1 232 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 IRGCQ6NXR0 463 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 DUS1LQ6P1R4 473 aaKnown RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 TAS2R42Q7RTR8 314 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 DTX1Q86Y01 620 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 SLC13A5Q86YT5 568 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 NXPE1Q8N323 547 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 IL22RA1Q8N6P7 574 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ULK4Q96C45 1275 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZNF514Q96K75 400 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 C9orf72Q96LT7 481 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 COPS8Q99627 209 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 WWP1Q9H0M0 922 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ARNT2Q9HBZ2 717 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 APMAPQ9HDC9 416 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZNF148Q9UQR1 794 aa16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 DNMT3AQ9Y6K1 912 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-202ENST00000308161 MN1Q10571 1320 aaPredicted RBP16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 MGAT4DA6NG13 374 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 CFAP99D6REC4 459 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms