RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 VARSP26640 1264 aaKnown RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 CAPGP40121 348 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 RENBPP51606 427 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 NEK2P51955 445 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 NUDT6P53370 316 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 DMC1Q14565 340 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 SIRPB2Q5JXA9 342 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 CLEC14AQ86T13 490 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 LRRTM3Q86VH5 581 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 LGI2Q8N0V4 545 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 UTP15Q8TED0 518 aaKnown RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 CENPIQ92674 756 aaPredicted RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 GPR63Q9BZJ6 419 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 REXO4Q9GZR2 422 aaKnown RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 A0A0D9SEW6 157 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 DFNA5O60443 496 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 PRKD3O94806 890 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 SHMT2P34897 504 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 RFC2P35250 354 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 FAM174BQ3ZCQ3 159 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 ZNF678Q5SXM1 525 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 NANOGP8Q6NSW7 305 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 ISCA2Q86U28 154 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 GPSM1Q86YR5 675 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 BORCS5Q969J3 196 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 TPK1Q9H3S4 243 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 NANOGQ9H9S0 305 aa14.42□□□□□ -0.1
PTPN9-201ENST00000306726 URB1O60287 2271 aaKnown RBP14.42□□□□□ -0.1
PTPN9-201ENST00000306726 G3V2T6 193 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 LSM1O15116 133 aaKnown RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 TBX1O43435 398 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 COL6A1P12109 1028 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 JAK1P23458 1154 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 RCVRNP35243 200 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 EPS8Q12929 822 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FAM98BQ52LJ0 330 aaKnown RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 PYCR3Q53H96 274 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 MBOAT1Q6ZNC8 495 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 NANOGNBQ7Z5D8 188 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 THEM5Q8N1Q8 247 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 TFAP2CQ92754 450 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FBXO32Q969P5 355 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FAR2Q96K12 515 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 KIFC1Q9BW19 673 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 EPB41L1Q9H4G0 881 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GPR32O75388 356 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 AZGP1P25311 298 aaKnown RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 OPRL1P41146 370 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GALNT2Q10471 571 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 BROXQ5VW32 411 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 AHSA2Q719I0 299 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 EEF1AKMT1Q8WVE0 214 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 CCDC126Q96EE4 140 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 ZNF597Q96LX8 424 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GPR78Q96P69 363 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 RHNO1Q9BSD3 238 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 NPLQ9BXD5 320 aaPredicted RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GSTO2Q9H4Y5 243 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 CNGB3Q9NQW8 809 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 TAS2R13Q9NYV9 303 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 WWOXQ9NZC7 414 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 PTGESO14684 152 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 ECI2O75521 394 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 LRRC74AQ0VAA2 488 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 INAQ16352 499 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 POM121L1PQ3SYA9 428 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 SLC39A5Q6ZMH5 540 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GATAD2AQ86YP4 633 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 KRTCAP2Q8N6L1 136 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 POC5Q8NA72 575 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 TRPV3Q8NET8 790 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 NCSTNQ92542 709 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 UBE2FQ969M7 185 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 HIPK3Q9H422 1215 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GMIPQ9P107 970 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 PCDHB3Q9Y5E6 796 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 NINQ8N4C6 2090 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FUOMA2VDF0 154 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 M0R129 80 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 MATN3O15232 486 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 THRBP10828 461 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 IMPDH1P20839 514 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 GKP32189 559 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 EMP3P54852 163 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 SMN1Q16637 294 aaKnown RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FAM214AQ32MH5 1076 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 STXBP5Q5T5C0 1151 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 LYSMD3Q7Z3D4 306 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 ZNF540Q8NDQ6 660 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 OR4L1Q8NH43 312 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 RORBQ92753 470 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FAM120BQ96EK7 910 aaKnown RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 DMRTB1Q96MA1 342 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 FKBPLQ9UIM3 349 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 HS3ST4Q9Y661 456 aa14.41□□□□□ -0.1
PTPN9-201ENST00000306726 DNMT3AQ9Y6K1 912 aaPredicted RBP14.41□□□□□ -0.1
PTPN9-201ENST00000306726 SH3PXD2BA1X283 911 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 PSMD11O00231 422 aa14.4□□□□□ -0.1
PTPN9-201ENST00000306726 MAFKO60675 156 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms