RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 UBA6A0AVT1 1052 aaPredicted RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NUDT21O43809 227 aaKnown RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NDUFS3O75489 264 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TTC4O95801 387 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GSTM1P09488 218 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OGNP20774 298 aaKnown RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GSTM4Q03013 218 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HHEXQ03014 270 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CAV1Q03135 178 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DMPKQ09013 629 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NFE2L1Q14494 772 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HLTFQ14527 1009 aaKnown RBP eCLIP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SMAD1Q15797 465 aaKnown RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LONRF1Q17RB8 773 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SYTL3Q4VX76 610 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SPANXN3Q5MJ09 141 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MICALCLQ6ZW33 695 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CENPUQ71F23 418 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 C11orf96Q7Z7L8 435 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GALNT15Q8N3T1 639 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 BEND7Q8N7W2 519 aaPredicted RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OR2L2Q8NH16 312 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 WDR48Q8TAF3 677 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC37A2Q8TED4 501 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PATE1Q8WXA2 126 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CXorf40BQ96DE9 158 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CFAP36Q96G28 342 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SIGLEC10Q96LC7 697 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LINC00615Q96LM1 132 aaPredicted RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 EBNA1BP2Q99848 306 aaKnown RBP10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCDC3Q9BQI4 270 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FAM167BQ9BTA0 163 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PRDM8Q9NQV8 689 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LRIT1Q9P2V4 623 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC23A2Q9UGH3 650 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CHMP2BQ9UQN3 213 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ST14Q9Y5Y6 855 aa10.81□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TRBV23OR9-2A0A075B6M9 112 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MGAT4DA6NG13 374 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GOLGA8KD6RF30 607 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GOLGA8TH3BQL2 631 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PRMT5O14744 637 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 VIPP01282 170 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC35G4P0C7Q5 338 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PNLIPP16233 465 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RPL10P27635 214 aaKnown RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DRG2P55039 364 aaKnown RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PDIA2Q13087 525 aaKnown RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SPIDRQ14159 915 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SEMA3AQ14563 771 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CRYMQ14894 314 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PERM1Q5SV97 790 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HES3Q5TGS1 186 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DUPD1Q68J44 220 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZNF470Q6ECI4 717 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PTRHD1Q6GMV3 140 aaKnown RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RAB44Q7Z6P3 723 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LDB1Q86U70 411 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TMEM135Q86UB9 458 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KCNMB4Q86W47 210 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LMNTD2Q8IXW0 634 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SFRP1Q8N474 314 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ARL14Q8N4G2 192 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MMGT1Q8N4V1 131 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NAT14Q8WUY8 206 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ELMO1Q92556 727 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SH3KBP1Q96B97 665 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCDC97Q96F63 343 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PANX3Q96QZ0 392 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC38A3Q99624 504 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TRIM56Q9BRZ2 755 aaKnown RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCM2Q9BSQ5 444 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 C20orf96Q9NUD7 363 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 POT1Q9NUX5 634 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MARCH4Q9P2E8 410 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZC3H7BQ9UGR2 993 aaKnown RBP10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ACSL5Q9ULC5 683 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RNF215Q9Y6U7 377 aa10.8□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 COL27A1Q8IZC6 1860 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZCWPW2A0A1B0GU75 182 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 C17orf113A0A1B0GUU1 675 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IFRD1O00458 451 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HYAL3O43820 417 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OPA1O60313 960 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OR1I1O60431 355 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 BANF1O75531 89 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DKK1O94907 266 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 EML2O95834 649 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RPLP0P05388 317 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ARNTP27540 789 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ELK3P41970 407 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FASLGP48023 281 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PLTPP55058 493 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 EIF3BP55884 814 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC7A5Q01650 507 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GUCY2DQ02846 1103 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 BOP1Q14137 746 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms