RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FAM71AQ8IYT1 594 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 SEC14L3Q9UDX4 400 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ADAM30Q9UKF2 790 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 MAFBQ9Y5Q3 323 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 NUDT17P0C025 328 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 SLC35G6P0C7Q6 338 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 CCKBRP32239 447 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 GTF2H2Q13888 395 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 CPTPQ5TA50 214 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 TTC23Q5W5X9 447 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ALG1LQ6GMV1 187 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 GTF2H2CQ6P1K8 395 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 MED27Q6P2C8 311 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 UBQLNLQ8IYU4 475 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 SLC34A3Q8N130 599 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 SLC4A11Q8NBS3 891 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 BRSK1Q8TDC3 778 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 EZH1Q92800 747 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ITCHQ96J02 903 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 TGM7Q96PF1 710 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 SPATA9Q9BWV2 254 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 WDR26Q9H7D7 661 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 C11orf16Q9NQ32 467 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ERVW-1Q9UQF0 538 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 GLOD5A6NK44 160 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 TRAF3Q13114 568 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 OR2L5Q8NG80 312 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 DGAT2Q96PD7 388 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 APOL4Q9BPW4 351 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 TLR10Q9BXR5 811 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 PPCSQ9HAB8 311 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 PLCL2Q9UPR0 1127 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 A0A1W2PP55 124 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 RNF225M0QZC1 329 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 CILPO75339 1184 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 CLDN7O95471 211 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 HNRNPH1P31943 449 aaKnown RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ARL2P36404 184 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ATRNL1Q5VV63 1379 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 CARD17Q5XLA6 110 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 TNFAIP8L2Q6P589 184 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 SNX20Q7Z614 316 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ZCCHC9Q8N567 271 aaKnown RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 OXR1Q8N573 874 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 LRRC52Q8N7C0 313 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 BAP1Q92560 729 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ATOH1Q92858 354 aaPredicted RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 VCPIP1Q96JH7 1222 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ELAC1Q9H777 363 aaKnown RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 PARPBPQ9NWS1 579 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 LEFTY2O00292 366 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 KLRC4O43908 158 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 EOMESO95936 686 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 EOGTQ5NDL2 527 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ANKRD26P1Q6NSI1 321 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 VSTM1Q6UX27 236 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 HCAR2Q8TDS4 363 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 TRIB2Q92519 343 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 CLP1Q92989 425 aaKnown RBP7.72□□□□□ -1.17
SCN9A-201ENST00000303354 ACBD6Q9BR61 282 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 COPS4Q9BT78 406 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 LHX5Q9H2C1 402 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 MINDY3Q9H8M7 445 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 EHD3Q9NZN3 535 aa7.72□□□□□ -1.17
SCN9A-201ENST00000303354 AZIN1O14977 448 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 NNATQ16517 81 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 GPR65Q8IYL9 337 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 CRYBG2Q8N1P7 616 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 BEND7Q8N7W2 519 aaPredicted RBP7.71□□□□□ -1.17
SCN9A-201ENST00000303354 TELO2Q9Y4R8 837 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 B3GALT2O43825 422 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 METTL18O95568 372 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 ME2P23368 584 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF844Q08AG5 666 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 TEX44Q53QW1 395 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 BRMS1LQ5PSV4 323 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 RTL4Q6ZR62 310 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF567Q8N184 647 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 OR5T3Q8NGG3 340 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 SH3YL1Q96HL8 342 aaPredicted RBP7.71□□□□□ -1.17
SCN9A-201ENST00000303354 HSD17B14Q9BPX1 270 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 CENPMQ9NSP4 180 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 RGS17Q9UGC6 210 aaPredicted RBP7.71□□□□□ -1.17
SCN9A-201ENST00000303354 MAU2Q9Y6X3 613 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 MGRN1O60291 552 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 C9P02748 559 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 JUPP14923 745 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 SLC7A2P52569 658 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 RAB14P61106 215 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 SCN1BQ07699 218 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 PDGFRLQ15198 375 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 PLEKHG6Q3KR16 790 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 ANKRD22Q5VYY1 191 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 NOXRED1Q6NXP6 359 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 RORBQ92753 470 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 SEMA3GQ9NS98 782 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 KLRF1Q9NZS2 232 aa7.71□□□□□ -1.17
SCN9A-201ENST00000303354 TBX1O43435 398 aa7.71□□□□□ -1.18
SCN9A-201ENST00000303354 NCBP2P52298 156 aaKnown RBP eCLIP7.71□□□□□ -1.185e-8■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms