RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SLC35C2Q9NQQ7 365 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF142P52746 1687 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CXCR6O00574 342 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SLC6A4P31645 630 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SLC1A5Q15758 541 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SMYD5Q6GMV2 418 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PHYKPLQ8IUZ5 450 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 C10orf82Q8WW14 230 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CPT1BQ92523 772 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SLC38A4Q969I6 547 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CREB3L1Q96BA8 519 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 AURKBQ96GD4 344 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 AIFM2Q9BRQ8 373 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 EBF2Q9HAK2 575 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 MAGEB17A8MXT2 336 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 C8BP07358 591 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 EEFSECP57772 596 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CBLBQ13191 982 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ULK3Q6PHR2 472 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 BTN2A1Q7KYR7 527 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CDADC1Q9BWV3 514 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SLC25A51Q9H1U9 297 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 MAT2BQ9NZL9 334 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 HEBP2Q9Y5Z4 205 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SMIM10L2AP0DMW4 78 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SMIM10L2BP0DMW5 78 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 NDST2P52849 883 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 FAM117BQ6P1L5 589 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 USP30Q70CQ3 517 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ZBTB45Q96K62 511 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 TUBA1CQ9BQE3 449 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 LGR4Q9BXB1 951 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CNOT6Q9ULM6 557 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 TBC1D24Q9ULP9 559 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PLIN4Q96Q06 1357 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 TBL1XO60907 577 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 C7P10643 843 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 GSTM3P21266 225 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 KELP23276 732 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ARCN1P48444 511 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PHC1P78364 1004 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 NDUFA9Q16795 377 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 FSTL4Q6MZW2 842 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 VSTM1Q6UX27 236 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 FAM151BQ6UXP7 276 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 DET1Q7L5Y6 550 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 TTC29Q8NA56 475 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 OR10H5Q8NGA6 315 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 TTYH3Q9C0H2 523 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 C12orf4Q9NQ89 552 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 KIAA1522Q9P206 1035 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 FNIP2Q9P278 1114 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CNTN6Q9UQ52 1028 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 DNM1LO00429 736 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CILPO75339 1184 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 C2P06681 752 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CCNFP41002 786 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 VWA5B1Q5TIE3 1220 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 C16orf59Q7L2K0 433 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SAMD7Q7Z3H4 446 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 DENND1CQ8IV53 801 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PLD5Q8N7P1 536 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 RAD51AP1Q96B01 352 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PLD4Q96BZ4 506 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 MRPL17Q9NRX2 175 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 NDOR1Q9UHB4 597 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 POMPQ9Y244 141 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 COL14A1Q05707 1796 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ABHD14A-ACY1A0A1B0GW23 586 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 GABRDO14764 452 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SPTLC1O15269 473 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 NOL4O94818 638 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 HSD17B2P37059 387 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ABCG1P45844 678 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ADAM8P78325 824 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 EFHD2Q96C19 240 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 A0A0U1RQJ8 604 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 KCNU1A8MYU2 1149 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 GRM6O15303 877 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF3P17036 446 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 WEE1P30291 646 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 IGFALSP35858 605 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 MAGEA2P43356 314 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CLCQ05315 142 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ADAM15Q13444 863 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CPSF6Q16630 551 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ANKS1BQ7Z6G8 1248 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CMC1Q7Z7K0 106 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 DDX60Q8IY21 1712 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PM20D2Q8IYS1 436 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 OR2L5Q8NG80 312 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 DCAKDQ8WVC6 231 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 KCTD7Q96MP8 289 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ZNHIT2Q9UHR6 403 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms